Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   ST90729_RS05515 Genome accession   NZ_CP065480
Coordinates   1060626..1061108 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain 90729     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1055626..1066108
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST90729_RS05495 (ST90729_05505) pepT 1056107..1057330 (-) 1224 WP_116920249.1 peptidase T -
  ST90729_RS05500 (ST90729_05510) lepB 1057538..1058095 (-) 558 WP_002945984.1 signal peptidase I -
  ST90729_RS05505 (ST90729_05515) - 1058218..1059447 (-) 1230 WP_002953086.1 tetratricopeptide repeat protein -
  ST90729_RS05510 (ST90729_05520) - 1059437..1060615 (-) 1179 WP_347116211.1 AI-2E family transporter -
  ST90729_RS05515 (ST90729_05525) mutX 1060626..1061108 (-) 483 WP_011226072.1 8-oxo-dGTP diphosphatase Machinery gene
  ST90729_RS05520 (ST90729_05530) ftsX 1061264..1062193 (-) 930 WP_206285011.1 permease-like cell division protein FtsX -
  ST90729_RS05525 (ST90729_05535) ftsE 1062186..1062878 (-) 693 WP_022096763.1 cell division ATP-binding protein FtsE -
  ST90729_RS05535 (ST90729_05545) queG 1064117..1065235 (-) 1119 WP_180473243.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=447695 ST90729_RS05515 WP_011226072.1 1060626..1061108(-) (mutX) [Streptococcus thermophilus strain 90729]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=447695 ST90729_RS05515 WP_011226072.1 1060626..1061108(-) (mutX) [Streptococcus thermophilus strain 90729]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706