Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ST90729_RS02715 Genome accession   NZ_CP065480
Coordinates   504876..506663 (+) Length   595 a.a.
NCBI ID   WP_011225638.1    Uniprot ID   Q5M5E9
Organism   Streptococcus thermophilus strain 90729     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 499876..511663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST90729_RS02695 - 499915..500427 (+) 513 WP_347116734.1 ABC transporter permease -
  ST90729_RS02700 (ST90729_02685) rplJ 500927..501430 (+) 504 WP_011225635.1 50S ribosomal protein L10 -
  ST90729_RS02705 (ST90729_02690) rplL 501505..501873 (+) 369 WP_011225636.1 50S ribosomal protein L7/L12 -
  ST90729_RS02710 (ST90729_02695) rcrP 503127..504863 (+) 1737 WP_011225637.1 ABC transporter ATP-binding protein Regulator
  ST90729_RS02715 (ST90729_02700) rcrQ 504876..506663 (+) 1788 WP_011225638.1 ABC transporter ATP-binding protein Regulator
  ST90729_RS02720 (ST90729_02705) queA 506761..507804 (-) 1044 WP_011225639.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  ST90729_RS02725 (ST90729_02710) - 507954..508655 (+) 702 WP_041826983.1 glucosamine-6-phosphate deaminase -
  ST90729_RS02730 (ST90729_02715) - 508821..510116 (-) 1296 WP_011680875.1 GHKL domain-containing protein -
  ST90729_RS02735 (ST90729_02720) - 510116..510826 (-) 711 WP_004197213.1 LytTR family DNA-binding domain-containing protein -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66541.69 Da        Isoelectric Point: 5.1433

>NTDB_id=447678 ST90729_RS02715 WP_011225638.1 504876..506663(+) (rcrQ) [Streptococcus thermophilus strain 90729]
MKDNKKKTTHSSSFGRLWSYLQVYRFPLYLAIFLKIISVIMSVIEPVVIGLAITELTKNTLDIIKGVAGAHINVSYVGLV
LVFYLLRGLIYELASYYSNYFMTNAVQATVQDMRNEMIEKINRTSVSYFDKQQFGDLLGRFTSDVETVSNALQQSFLQVV
NAIFTLALVIGTVLYLNLQLGAVVVITIPISYFGARFIMSKSQPYFKQQADALGTLNGFVQENLTGFNVIKLFGREGRSL
DDFKEITEDLQKVGFKANFISGLMMPFLNGLSDLTYLIIAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVIFNHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRKDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEINQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=447678 ST90729_RS02715 WP_011225638.1 504876..506663(+) (rcrQ) [Streptococcus thermophilus strain 90729]
ATGAAGGATAATAAAAAGAAAACAACTCATTCCTCAAGTTTTGGCCGCCTTTGGTCATACTTGCAGGTTTATCGTTTCCC
ACTTTACTTAGCTATTTTCCTGAAAATTATTAGTGTCATCATGAGTGTTATTGAGCCGGTGGTCATTGGTTTAGCCATTA
CGGAACTGACTAAAAACACACTGGACATCATTAAGGGGGTAGCAGGTGCTCATATCAACGTGTCCTACGTTGGTTTAGTT
TTGGTCTTTTACCTCTTGCGTGGTCTCATCTATGAGTTGGCTTCTTACTATTCCAACTATTTTATGACCAATGCCGTGCA
AGCAACGGTTCAGGATATGCGAAATGAGATGATTGAGAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCAACAAT
TTGGAGACCTTTTGGGTCGCTTTACTAGTGACGTCGAGACAGTTTCAAATGCCTTGCAGCAGTCATTCTTGCAGGTTGTC
AACGCCATCTTTACTCTAGCCTTGGTTATTGGGACAGTGCTTTACCTTAATCTTCAGTTGGGAGCTGTGGTTGTTATCAC
TATTCCGATTTCTTACTTTGGTGCTCGCTTCATTATGAGTAAGTCTCAACCTTACTTTAAGCAGCAGGCTGATGCCCTAG
GTACTCTTAACGGTTTTGTTCAGGAAAATCTGACTGGTTTCAATGTGATTAAACTTTTTGGACGTGAGGGTAGATCTTTA
GACGACTTTAAAGAAATTACGGAAGATCTTCAAAAGGTAGGTTTTAAGGCCAATTTCATTTCAGGCCTCATGATGCCTTT
CCTTAATGGTTTATCTGACTTGACCTATCTAATTATTGCCGTCCTAGGTGGTTTGCAAGTCTTGGCTGGTCGCTTGACGA
TTGGTAATATGCAGGCTTTCGTTCAGTACGTTTGGCAGATTAATCAACCTATTCAGAACTTGACTCAGTTGGCTGGACAA
TTGCAGAGTGCTAAATCTTCCTTGGACCGTATTTTCCAACTGATGGATGAACCAGACGAGGCTAATGATGCTACTGAGGT
GCTTGAAGGAGATTTAACTGGTCAAGTTATCTTTAATCATGTGGACTTCCAGTATGTAGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAGGTTAATCCTGGTGAAATGGTGGCTATTGTCGGTCCTACCGGTGCTGGAAAATCAACTATTATCAAT
CTTCTCATGCGTTTCTATGATGTTACTGCAGGTTCTATCTCGGTTGATGGTCATGATATACGCAACTTGTCGCGTAAAGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGTTTTGGTA
ATCTTGAGGCAACTGATGAAGAAATTGTTGAAGCAGCGAAGGCTGCCAATGTGGATCACTTTATCCGTACGCTGCCTGGT
GGCTACAACATGGAAATAAACCAGGAATCAAGTAACATTTCACTGGGACAAAAGCAACTTTTGACCATAGCCCGTGCACT
TTTGGCTGACCCTAAAATCTTGATTTTGGACGAGGCAACCTCATCAGTTGATACCCGTCTGGAACTCTTGATTCAAAAAG
CCATGAAGACACTTATGCAAGGTCGAACAAGTTTTGTCATCGCTCACCGTTTATCAACAATCCAAGAAGCAGACAAGATT
TTGGTCCTTAAAGATGGACAAATCATCGAACAAGGGAACCATGAATCCCTCCTTGCAGATAAAGGTTTCTATTACGATTT
GTATAATAGTCAATTTGCAGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(373-521)

ABC transporter transmembrane region (ABC_membrane)

(29-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M5E9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.689

100

0.427