Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   ST90728_RS05590 Genome accession   NZ_CP065479
Coordinates   1069950..1070432 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain 90728     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1064950..1075432
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST90728_RS05570 (ST90728_05575) pepT 1065431..1066654 (-) 1224 WP_096811485.1 peptidase T -
  ST90728_RS05575 (ST90728_05580) lepB 1066863..1067420 (-) 558 WP_002953084.1 signal peptidase I -
  ST90728_RS05580 (ST90728_05585) - 1067542..1068771 (-) 1230 WP_011681192.1 tetratricopeptide repeat protein -
  ST90728_RS05585 (ST90728_05590) - 1068761..1069939 (-) 1179 WP_096811486.1 AI-2E family transporter -
  ST90728_RS05590 (ST90728_05595) mutX 1069950..1070432 (-) 483 WP_011226072.1 8-oxo-dGTP diphosphatase Machinery gene
  ST90728_RS05595 (ST90728_05600) ftsX 1070588..1071517 (-) 930 WP_096811487.1 permease-like cell division protein FtsX -
  ST90728_RS05600 (ST90728_05605) ftsE 1071510..1072202 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  ST90728_RS05610 (ST90728_05615) queG 1073441..1074559 (-) 1119 WP_002953100.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=447585 ST90728_RS05590 WP_011226072.1 1069950..1070432(-) (mutX) [Streptococcus thermophilus strain 90728]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=447585 ST90728_RS05590 WP_011226072.1 1069950..1070432(-) (mutX) [Streptococcus thermophilus strain 90728]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706