Detailed information NTG0447397

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: HPY13_RS17470
• Genome accession: NZ_CP053797
• Coordinates: 790490..791584 (-)
• Length: 364 a.a.
• NCBI ID: WP_094392623.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain SL4G
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 785490..796584

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPY13_RS17450 (HPY13_17505)	-	785845..786243 (+)	399	WP_000831416.1	YgiW/YdeI family stress tolerance OB fold protein	-
HPY13_RS17455 (HPY13_17510)	-	786481..786999 (+)	519	WP_000914961.1	hypothetical protein	-
HPY13_RS17460 (HPY13_17515)	-	787242..787907 (+)	666	WP_000268198.1	flagellar brake protein	-
HPY13_RS17465 (HPY13_17520)	luxQ	787899..790472 (-)	2574	WP_094392624.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
HPY13_RS17470 (HPY13_17525)	luxP	790490..791584 (-)	1095	WP_094392623.1	substrate-binding domain-containing protein	Regulator
HPY13_RS17475 (HPY13_17530)	traF	791796..792956 (-)	1161	WP_001025864.1	conjugal transfer protein TraF	-
HPY13_RS17480 (HPY13_17535)	-	793058..793363 (-)	306	WP_000429067.1	GIY-YIG nuclease family protein	-
HPY13_RS17485 (HPY13_17540)	-	793380..794030 (-)	651	WP_094392622.1	YceH family protein	-
HPY13_RS17490 (HPY13_17545)	-	794072..794269 (-)	198	WP_001246071.1	hypothetical protein	-
HPY13_RS17495 (HPY13_17550)	-	794457..794777 (+)	321	WP_001089529.1	DUF496 family protein	-
HPY13_RS17500 (HPY13_17555)	-	795190..795441 (+)	252	WP_001882582.1	YgjV family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41237.95 Da
• Isoelectric Point: 6.7045

>NTDB_id=447397 HPY13_RS17470 WP_094392623.1 790490..791584(-) (luxP) [Vibrio cholerae strain SL4G]
MKRKLISPLFLIAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSTLTVAQKQPVIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEYGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKAVPLVYSGDFEVVTKQDSAARIVELKARAFRYSDR

Nucleotide

• Length: 1095 bp

>NTDB_id=447397 HPY13_RS17470 WP_094392623.1 790490..791584(-) (luxP) [Vibrio cholerae strain SL4G]
ATGAAAAGAAAGCTAATATCTCCGCTGTTTCTGATAGCAGCACTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGTACGTTGACGGTGGCGCAAAAACAACCCGTTATTATTTCAGTGGTCTATCCCGGACAGCAAATTTCCGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGATGCTTTGGGGATTCGCTATCAAATCAATCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCCTTGATGGAAGCGCTGAAAAATAAGAGCGACTATCTGATTTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAGCATGTGCTGCACTCCTCTGAAACGAAACTGATTTTGCAAAACATC
ACGACGCCAGTCAAAGATTGGCAAGGCAAGCAGCCCATGATGTACATCGGTTTTGATCATGAGTACGGCGCGCAATTATT
GGCGCAATATTACCAAGCACATGCCCCGAAAAAGCCGTACTCAGTACTTTATTTTTCCGAGGGGTATATCAGTGAAGCAC
GGGGAGATACCTTCATTCAAGATATGAACGCGGTGCACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACTCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
GGCTTTGGGGGCTGCGCAGGCACTGAAAGAGCTGAATCGACAAGATATTCTGGTCAATGGTTGGGGAGGCGGCTCGGCAG
AGCTTGAAGCGCTTGCCAAAGGAGAATTGGATGTCACTGTGATGCGTATGAATGACGATACGGGTGTGGCGATGGCCGAA
GCGATTAAATGGGATTTGGAAGGGAAAGCCGTACCTTTGGTCTATTCAGGCGATTTTGAAGTGGTCACCAAACAAGATTC
AGCAGCACGTATTGTAGAACTGAAAGCTCGGGCTTTCCGTTATTCGGATCGTTAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-323)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	98.901	100	0.989