Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   ST4078_RS05330 Genome accession   NZ_CP065477
Coordinates   1002886..1003368 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain 4078     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 997886..1008368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST4078_RS05310 (ST4078_05285) pepT 998367..999590 (-) 1224 WP_014608366.1 peptidase T -
  ST4078_RS05315 (ST4078_05290) lepB 999798..1000355 (-) 558 WP_011681191.1 signal peptidase I -
  ST4078_RS05320 (ST4078_05295) - 1000478..1001707 (-) 1230 WP_002953086.1 tetratricopeptide repeat protein -
  ST4078_RS05325 (ST4078_05300) - 1001697..1002875 (-) 1179 WP_014608367.1 AI-2E family transporter -
  ST4078_RS05330 (ST4078_05305) mutX 1002886..1003368 (-) 483 WP_011226072.1 NUDIX hydrolase Machinery gene
  ST4078_RS05335 (ST4078_05310) ftsX 1003524..1004453 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  ST4078_RS05340 (ST4078_05315) ftsE 1004446..1005138 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  ST4078_RS05350 (ST4078_05325) queG 1006377..1007495 (-) 1119 WP_011226076.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=447378 ST4078_RS05330 WP_011226072.1 1002886..1003368(-) (mutX) [Streptococcus thermophilus strain 4078]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=447378 ST4078_RS05330 WP_011226072.1 1002886..1003368(-) (mutX) [Streptococcus thermophilus strain 4078]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706