Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   GE021_RS07505 Genome accession   NZ_CP053792
Coordinates   1511338..1512375 (-) Length   345 a.a.
NCBI ID   WP_125074491.1    Uniprot ID   A0A3P5XQH3
Organism   Streptococcus canis strain HL_77_1     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1506338..1517375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE021_RS07485 (GE021_007480) - 1507279..1508757 (-) 1479 WP_125074493.1 sugar ABC transporter ATP-binding protein -
  GE021_RS07490 (GE021_007485) rbsD 1508773..1509171 (-) 399 WP_125074492.1 D-ribose pyranase -
  GE021_RS07495 (GE021_007490) rbsK 1509146..1510057 (-) 912 WP_093999242.1 ribokinase -
  GE021_RS07500 (GE021_007495) - 1510050..1511033 (-) 984 WP_003044432.1 LacI family DNA-binding transcriptional regulator -
  GE021_RS07505 (GE021_007500) sepM 1511338..1512375 (-) 1038 WP_125074491.1 SepM family pheromone-processing serine protease Regulator
  GE021_RS07510 (GE021_007505) coaD 1512362..1512853 (-) 492 WP_125074490.1 pantetheine-phosphate adenylyltransferase -
  GE021_RS07515 (GE021_007510) rsmD 1512843..1513382 (-) 540 WP_093999508.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  GE021_RS07520 (GE021_007515) asnA 1513575..1514567 (-) 993 WP_093999507.1 aspartate--ammonia ligase -
  GE021_RS07525 (GE021_007520) arcC 1514899..1515849 (-) 951 WP_125074495.1 carbamate kinase -
  GE021_RS11455 - 1516087..1516530 (+) 444 Protein_1462 transposase -

Sequence

Protein


Download         Length: 345 a.a.        Molecular weight: 37706.50 Da        Isoelectric Point: 9.8535

>NTDB_id=447283 GE021_RS07505 WP_125074491.1 1511338..1512375(-) (sepM) [Streptococcus canis strain HL_77_1]
MKTIKKIKWWLVSLFALVALLITLFFPLPYYVEMPGGAYDIRSVLQVNGKEDKGKGSYQFVAVSLSRASLAQLLYAWLTP
FTEISSVEDTTGGYSDADYIRINQFYMETSQNAAIYQALTLANKPVTLDYKGVYVLDVSKDSTFKGALNLADTVTGVNDK
QFKSSTELVDYVSHLKLGDKVTVQFMSDSRPKSETGRIIKLKNGKNGIGIALTDHTKVRSDDKIAFSTQGVGGPSAGLMF
TLDIYDQIVKEDLRKGRIIAGTGTIGKHGEVGDIGGAGLKVVAAAEAGAEIFFVPNNPVDKALKKTHPKAISNYEEAKRA
AKQLKTKMKIVPVTNVQEALAYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=447283 GE021_RS07505 WP_125074491.1 1511338..1512375(-) (sepM) [Streptococcus canis strain HL_77_1]
ATGAAAACAATTAAAAAAATCAAATGGTGGCTGGTTAGCCTTTTTGCTCTAGTAGCTTTGCTGATTACCCTCTTTTTCCC
TCTACCTTATTACGTTGAAATGCCTGGCGGCGCTTATGATATTCGCTCTGTTTTACAAGTTAATGGAAAAGAAGATAAAG
GGAAGGGATCTTATCAATTTGTAGCCGTTAGCCTTAGCCGCGCCAGTTTGGCACAGTTATTGTATGCTTGGTTAACCCCT
TTTACCGAAATCAGTTCCGTTGAAGACACTACGGGTGGTTACAGTGATGCTGATTATATCCGCATTAACCAATTCTACAT
GGAAACCTCGCAAAATGCAGCGATCTATCAGGCATTAACCTTGGCGAACAAACCCGTTACGTTGGATTACAAAGGGGTTT
ACGTATTAGATGTTAGCAAAGACTCAACCTTCAAAGGTGCCTTGAATTTAGCAGATACTGTCACTGGTGTGAATGACAAG
CAATTTAAGAGTTCGACAGAGCTTGTGGACTATGTTTCTCATTTAAAACTTGGGGATAAAGTAACTGTTCAGTTTATGAG
TGATAGTCGGCCCAAGTCTGAGACAGGCCGTATTATTAAACTTAAAAACGGTAAAAATGGTATTGGGATTGCTCTTACAG
ACCATACTAAAGTTAGGTCAGATGATAAGATCGCGTTTAGCACGCAAGGTGTTGGTGGTCCCAGTGCTGGTCTGATGTTT
ACCCTTGATATTTATGACCAAATTGTCAAGGAGGATCTTCGTAAAGGTCGTATCATCGCAGGTACAGGAACGATTGGCAA
ACATGGCGAAGTGGGAGATATTGGTGGCGCAGGCCTTAAAGTCGTAGCTGCCGCAGAAGCAGGTGCTGAGATTTTCTTTG
TTCCTAACAATCCTGTGGACAAGGCCTTAAAAAAAACGCATCCCAAAGCCATCAGCAACTATGAAGAAGCTAAGCGAGCA
GCTAAGCAATTAAAAACTAAAATGAAGATTGTGCCTGTGACCAATGTTCAGGAAGCTTTGGCTTATCTTCGGAAATGA

Domains

Predicted by InterproScan.

Lon protease (S16) C-terminal proteolytic domain (Lon_C)

(233-304)

PDZ domain (PDZ_2)

(130-191)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3P5XQH3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

72.464

100

0.725