Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   ST4052_RS05150 Genome accession   NZ_CP065476
Coordinates   982301..982783 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain 4052     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 977301..987783
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST4052_RS05130 (ST4052_05215) pepT 977781..979004 (-) 1224 WP_011226068.1 peptidase T -
  ST4052_RS05135 (ST4052_05220) lepB 979213..979770 (-) 558 WP_002953084.1 signal peptidase I -
  ST4052_RS05140 (ST4052_05225) - 979893..981122 (-) 1230 WP_002953086.1 tetratricopeptide repeat protein -
  ST4052_RS05145 (ST4052_05230) - 981112..982290 (-) 1179 WP_011227264.1 AI-2E family transporter -
  ST4052_RS05150 (ST4052_05235) mutX 982301..982783 (-) 483 WP_011226072.1 8-oxo-dGTP diphosphatase Machinery gene
  ST4052_RS05155 (ST4052_05240) ftsX 982939..983868 (-) 930 WP_084829635.1 permease-like cell division protein FtsX -
  ST4052_RS05160 (ST4052_05245) ftsE 983861..984553 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  ST4052_RS05170 (ST4052_05255) queG 985792..986910 (-) 1119 WP_180473243.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=447276 ST4052_RS05150 WP_011226072.1 982301..982783(-) (mutX) [Streptococcus thermophilus strain 4052]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=447276 ST4052_RS05150 WP_011226072.1 982301..982783(-) (mutX) [Streptococcus thermophilus strain 4052]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706