Detailed information NTG0447262

Bioinformatically predicted

Overview

• Name: comX/sigX/comX2/sigX2
• Type: Regulator
• Locus tag: GE021_RS02125
• Genome accession: NZ_CP053792
• Coordinates: 419782..420264 (+)
• Length: 160 a.a.
• NCBI ID: WP_125075072.1
• Uniprot ID: -
• Organism: Streptococcus canis strain HL_77_1
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	420866..421036	419782..420264	flank	602

Gene organization within MGE regions

Location: 419782..421036

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GE021_RS02125 (GE021_002125)	comX/sigX/comX2/sigX2	419782..420264 (+)	483	WP_125075072.1	competence protein ComX	Regulator

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 19362.20 Da
• Isoelectric Point: 6.5020

>NTDB_id=447262 GE021_RS02125 WP_125075072.1 419782..420264(+) (comX/sigX/comX2/sigX2) [Streptococcus canis strain HL_77_1]
MSIETGVVFEKVKPIILKLKRHYYIQLWEREDWLQEGYLILVSLLEQHPELLWEDERLYRYFKTKFSSYLKDVLRQQESQ
KRQFHKMAYEEIGDVAHAIPSGGLWLDDYVAYREVVEALEGQLSEEERLQFQALVRGERFKGRQALLRKLRPYFEGFERS

Nucleotide

• Length: 483 bp

>NTDB_id=447262 GE021_RS02125 WP_125075072.1 419782..420264(+) (comX/sigX/comX2/sigX2) [Streptococcus canis strain HL_77_1]
ATGTCGATAGAGACAGGAGTAGTGTTTGAGAAGGTGAAACCCATTATCTTGAAGTTGAAGCGTCATTATTATATTCAATT
GTGGGAGAGGGAGGATTGGTTACAGGAAGGGTATTTGATATTGGTGAGTCTCCTAGAGCAGCATCCTGAATTACTTTGGG
AAGACGAACGGTTGTATCGTTATTTTAAGACTAAGTTTTCATCGTATTTGAAGGATGTCTTGCGTCAGCAAGAAAGTCAG
AAGCGTCAGTTTCATAAAATGGCTTATGAGGAGATAGGTGATGTAGCACATGCGATTCCATCAGGTGGGTTATGGTTGGA
TGATTACGTGGCCTATAGGGAGGTGGTTGAGGCGTTAGAAGGGCAGTTGAGTGAAGAGGAGCGGTTACAGTTTCAGGCCT
TGGTGAGAGGGGAACGGTTTAAGGGAAGGCAGGCCTTGCTTAGGAAGTTGCGTCCTTATTTTGAGGGATTTGAGAGAAGT
TAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	78.981	98.125	0.775
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	78.981	98.125	0.775
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	78.344	98.125	0.769
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	78.344	98.125	0.769
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	77.707	98.125	0.762
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	77.707	98.125	0.762
comX/sigX	Streptococcus mutans UA159	53.947	95	0.512
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	48.667	93.75	0.456
comX	Streptococcus thermophilus LMG 18311	44.371	94.375	0.419
comX	Streptococcus thermophilus LMD-9	44.371	94.375	0.419
comX	Streptococcus sobrinus strain NIDR 6715-7	43.709	94.375	0.413
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	43.046	94.375	0.406
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	43.046	94.375	0.406
comX	Streptococcus salivarius SK126	42.384	94.375	0.4
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	42.384	94.375	0.4
comX/sigX	Streptococcus salivarius strain HSISS4	42.384	94.375	0.4
comX/comX2	Streptococcus pneumoniae Rx1	42	93.75	0.394
comX/comX1	Streptococcus pneumoniae Rx1	42	93.75	0.394
comX/comX2	Streptococcus pneumoniae D39	42	93.75	0.394
comX/comX1	Streptococcus pneumoniae D39	42	93.75	0.394
comX/comX2	Streptococcus pneumoniae R6	42	93.75	0.394
comX/comX1	Streptococcus pneumoniae R6	42	93.75	0.394
comX/comX2	Streptococcus pneumoniae TIGR4	42	93.75	0.394
comX/comX1	Streptococcus pneumoniae TIGR4	42	93.75	0.394
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	41.06	94.375	0.388
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	41.06	94.375	0.388
comX/sigX	Streptococcus suis D9	40	93.75	0.375
comX/sigX	Streptococcus suis isolate S10	40	93.75	0.375
comX/sigX	Streptococcus suis P1/7	40	93.75	0.375
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	39.073	94.375	0.369