Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ST4052_RS02490 Genome accession   NZ_CP065476
Coordinates   466970..467776 (+) Length   268 a.a.
NCBI ID   WP_011680838.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain 4052     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 461970..472776
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST4052_RS02470 (ST4052_02495) tuf 463019..464215 (+) 1197 WP_002949971.1 elongation factor Tu -
  ST4052_RS02475 (ST4052_02500) tpiA 464464..465222 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  ST4052_RS02480 (ST4052_02505) tmk 465460..466089 (+) 630 WP_002946312.1 dTMP kinase -
  ST4052_RS02485 (ST4052_02510) - 466098..466973 (+) 876 WP_347100912.1 DNA polymerase III subunit delta' -
  ST4052_RS02490 (ST4052_02515) yaaT 466970..467776 (+) 807 WP_011680838.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  ST4052_RS02495 (ST4052_02520) yabA 467763..468083 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  ST4052_RS02500 (ST4052_02525) rsmI 468086..468952 (+) 867 WP_002949974.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ST4052_RS02505 (ST4052_02530) - 469090..470325 (+) 1236 WP_347100913.1 ammonium transporter -
  ST4052_RS02510 (ST4052_02535) - 470336..470677 (+) 342 WP_041826978.1 P-II family nitrogen regulator -
  ST4052_RS02515 (ST4052_02540) - 470775..471431 (+) 657 WP_011225604.1 glycoside hydrolase family 73 protein -
  ST4052_RS02520 (ST4052_02545) - 471454..472275 (+) 822 WP_022096938.1 Cof-type HAD-IIB family hydrolase -
  ST4052_RS02525 (ST4052_02550) - 472294..472765 (-) 472 Protein_437 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29758.16 Da        Isoelectric Point: 4.5847

>NTDB_id=447262 ST4052_RS02490 WP_011680838.1 466970..467776(+) (yaaT) [Streptococcus thermophilus strain 4052]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=447262 ST4052_RS02490 WP_011680838.1 466970..467776(+) (yaaT) [Streptococcus thermophilus strain 4052]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTCTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.205

98.134

0.414