Detailed information    

insolico Bioinformatically predicted

Overview

Name   recR   Type   Machinery gene
Locus tag   ASU2_RS06880 Genome accession   NC_018690
Coordinates   1510688..1511293 (+) Length   201 a.a.
NCBI ID   WP_014992064.1    Uniprot ID   A0ABT1WXV0
Organism   Actinobacillus suis H91-0380     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1505688..1516293
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ASU2_RS06840 (ASU2_06770) dhaL 1505851..1506477 (+) 627 WP_014992057.1 dihydroxyacetone kinase subunit DhaL -
  ASU2_RS06845 (ASU2_06775) dhaM 1506486..1506893 (+) 408 WP_014992058.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  ASU2_RS06850 (ASU2_06780) - 1506968..1507813 (-) 846 WP_014992059.1 co-chaperone YbbN -
  ASU2_RS06855 (ASU2_06785) glpE 1507857..1508183 (-) 327 WP_014992060.1 thiosulfate sulfurtransferase GlpE -
  ASU2_RS06860 (ASU2_06790) exbB 1508381..1508833 (+) 453 WP_014992061.1 TonB-system energizer ExbB -
  ASU2_RS06865 (ASU2_06795) exbD 1508878..1509267 (+) 390 WP_014992062.1 TonB system transport protein ExbD -
  ASU2_RS06870 (ASU2_06800) - 1509277..1510122 (+) 846 WP_014992063.1 energy transducer TonB family protein -
  ASU2_RS06875 (ASU2_06805) - 1510291..1510620 (+) 330 WP_005600053.1 YbaB/EbfC family nucleoid-associated protein -
  ASU2_RS06880 (ASU2_06810) recR 1510688..1511293 (+) 606 WP_014992064.1 recombination mediator RecR Machinery gene
  ASU2_RS06885 (ASU2_06815) grxD 1511374..1511697 (+) 324 WP_039195759.1 Grx4 family monothiol glutaredoxin -
  ASU2_RS06890 (ASU2_06820) - 1511841..1512878 (+) 1038 WP_014992066.1 branched-chain amino acid aminotransferase -
  ASU2_RS06895 (ASU2_06825) - 1512966..1513310 (+) 345 WP_014992067.1 RidA family protein -
  ASU2_RS06900 (ASU2_06830) - 1513366..1514004 (+) 639 WP_014992068.1 hydrolase -
  ASU2_RS06905 (ASU2_06835) - 1514111..1515103 (-) 993 WP_014992069.1 peptide ABC transporter ATP-binding protein -
  ASU2_RS06910 (ASU2_06840) dppD 1515116..1516102 (-) 987 WP_014992070.1 dipeptide ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 22141.35 Da        Isoelectric Point: 6.4865

>NTDB_id=44726 ASU2_RS06880 WP_014992064.1 1510688..1511293(+) (recR) [Actinobacillus suis H91-0380]
MQISPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVNLSKALSEAMTHIGHCRSCRTFTEEDECNICKNPRRQMS
GQLCVVEMPEDIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQSRLENESFHEVILATNPTIEGDATANYIAEM
CRIHNVKVTRIAHGIPVGGSLEMVDGTTLSHSFAGRRDISL

Nucleotide


Download         Length: 606 bp        

>NTDB_id=44726 ASU2_RS06880 WP_014992064.1 1510688..1511293(+) (recR) [Actinobacillus suis H91-0380]
ATGCAAATTAGCCCTTTACTCGAAAACCTTATGGAAGCCCTGCGTGCATTACCCGGTGTCGGTCCAAAATCCGCACAGCG
TATGGCATATCATTTATTACAACGCAATCGTTCCGGCGGAGTGAACTTATCGAAAGCATTGAGCGAAGCAATGACACATA
TCGGTCATTGTCGTTCTTGTCGTACGTTTACCGAAGAAGACGAATGCAATATTTGTAAAAATCCTCGTCGTCAAATGAGC
GGTCAACTTTGTGTAGTTGAAATGCCGGAAGATATTCAAGCAATTGAACAAACCGGACAATTTTCAGGGCGCTATTTTGT
ATTAATGGGACATCTTTCCCCATTAGACGGCATTGGACCGAGAGAAATCGGCTTAGATCTATTACAAAGTCGTTTAGAGA
ACGAATCTTTTCACGAAGTGATTCTTGCCACCAATCCAACGATTGAGGGAGATGCAACGGCTAATTATATTGCGGAAATG
TGCCGCATCCACAATGTGAAAGTGACTCGAATTGCACACGGGATTCCGGTTGGCGGCTCATTAGAAATGGTAGACGGTAC
AACCCTTTCCCACTCTTTTGCCGGCAGACGAGATATTTCGTTATAA

Domains

Predicted by InterProScan.

RecR protein (RecR_ZnF)

(42-77)

Toprim domain (Toprim_4)

(82-172)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recR Bacillus subtilis subsp. subtilis str. 168

42.714

99.005

0.423
  recR Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

42

99.502

0.418

Multiple sequence alignment