Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   GE022_RS08280 Genome accession   NZ_CP053790
Coordinates   1691616..1692341 (-) Length   241 a.a.
NCBI ID   WP_003044963.1    Uniprot ID   A0A2D4DM13
Organism   Streptococcus canis strain HL_77_2     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1686616..1697341
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE022_RS08245 (GE022_008235) rnpM 1686658..1686954 (-) 297 WP_003044945.1 RNase P modulator RnpM -
  GE022_RS08250 (GE022_008240) nusA 1686970..1688127 (-) 1158 WP_159304445.1 transcription termination factor NusA -
  GE022_RS08255 (GE022_008245) rimP 1688298..1688780 (-) 483 WP_164227950.1 ribosome maturation factor RimP -
  GE022_RS08265 (GE022_008255) trmB 1689098..1689733 (-) 636 WP_093999293.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  GE022_RS08270 (GE022_008260) ccrZ 1689733..1690524 (-) 792 WP_003044956.1 cell cycle regulator CcrZ -
  GE022_RS08275 (GE022_008265) - 1690579..1691613 (-) 1035 WP_164405093.1 ABC transporter permease -
  GE022_RS08280 (GE022_008270) pptA 1691616..1692341 (-) 726 WP_003044963.1 ABC transporter ATP-binding protein Regulator
  GE022_RS08285 (GE022_008275) - 1692413..1692832 (+) 420 WP_125074751.1 HIT family protein -
  GE022_RS08290 (GE022_008280) - 1692829..1693146 (+) 318 WP_164405094.1 chemotaxis protein -
  GE022_RS08295 (GE022_008285) brpA 1693195..1694466 (-) 1272 WP_125074154.1 biofilm formation/cell division transcriptional regulator BrpA -
  GE022_RS08300 (GE022_008290) - 1694475..1694999 (-) 525 WP_164405095.1 GNAT family N-acetyltransferase -
  GE022_RS08305 (GE022_008295) tsaE 1694992..1695435 (-) 444 WP_039994873.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  GE022_RS08310 (GE022_008300) - 1695622..1697082 (-) 1461 WP_164405096.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26543.88 Da        Isoelectric Point: 4.8524

>NTDB_id=447231 GE022_RS08280 WP_003044963.1 1691616..1692341(-) (pptA) [Streptococcus canis strain HL_77_2]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGEISIDGLTLAENPADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAKPFLDMFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIKTLEIEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLAELQATFGDPSASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=447231 GE022_RS08280 WP_003044963.1 1691616..1692341(-) (pptA) [Streptococcus canis strain HL_77_2]
ATGTTAAACATTGAAAATCTAACGGGAGGCTACCTTAATATTCCCGTTTTAAAAGAGGTCTCATTTTCTGTTGGCAATGG
AGAATTGGTCGGTTTAATCGGGTTAAATGGAGCTGGAAAGTCAACGACCATCAATGAAATTATTGGTTTTTTAAAACCCT
ACAAGGGAGAAATCTCCATTGACGGCCTTACGCTGGCTGAAAATCCAGCAGACTACCGTAAAAAAATTGGTTTTATCCCA
GAAACTCCTAGTCTTTACGAAGAATTAACCTTGGCAGAGCATATTAATACTGTGGCTATGGCTTATGATATTGATGTGGA
GCTGGCCCAGAAACGGGCAAAGCCTTTTTTAGACATGTTTCGCTTGACAGATAAACTCGACTGGTTTCCTGTACATTTTT
CAAAGGGCATGAAGCAAAAAGTCATGATTATTTGTGCTTTTGTGATTGATCCCAGCTTGTTTATCCTTGATGAGCCTTTT
TTAGGGTTAGATCCACTAGCTATTTCGGACTTGATTAAGACTTTAGAGATTGAAAAAGCCAAAGGCAAATCGATTTTAAT
GAGTACTCACGTGCTAGACTCTGCTGAAAAAATGTGTGATCGTTTTGTGATTTTGCACCATGGTCAGGTGCGTGCTCAAG
GAACTCTTGCTGAGTTACAAGCGACTTTTGGAGATCCTTCGGCTAGCTTAAACGATATTTATTTGGCATTGACAAAAGAG
GGCTAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2D4DM13

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.732

99.17

0.751
  pptA Streptococcus thermophilus LMD-9

74.895

99.17

0.743