Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | GE023_RS00860 | Genome accession | NZ_CP053789 |
| Coordinates | 136772..137725 (+) | Length | 317 a.a. |
| NCBI ID | WP_003046195.1 | Uniprot ID | A0AAE4Q9T5 |
| Organism | Streptococcus canis strain HL_98_2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 131772..142725
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GE023_RS00820 (GE023_000820) | - | 132598..132963 (+) | 366 | WP_125073632.1 | DUF1033 family protein | - |
| GE023_RS00825 (GE023_000825) | comYA | 133050..133991 (+) | 942 | WP_003046182.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GE023_RS00830 (GE023_000830) | comYB | 133924..134958 (+) | 1035 | WP_223824829.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GE023_RS00835 (GE023_000835) | comYC | 134961..135287 (+) | 327 | WP_159305269.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GE023_RS00840 (GE023_000840) | comGD | 135262..135690 (+) | 429 | WP_236494085.1 | competence type IV pilus minor pilin ComGD | - |
| GE023_RS00845 (GE023_000845) | comGE | 135668..135943 (+) | 276 | WP_003046190.1 | competence type IV pilus minor pilin ComGE | - |
| GE023_RS00850 (GE023_000850) | comGF | 135924..136364 (+) | 441 | WP_003046192.1 | competence type IV pilus minor pilin ComGF | - |
| GE023_RS00855 (GE023_000855) | comGG | 136342..136722 (+) | 381 | WP_003046193.1 | competence type IV pilus minor pilin ComGG | - |
| GE023_RS00860 (GE023_000860) | comYH | 136772..137725 (+) | 954 | WP_003046195.1 | class I SAM-dependent methyltransferase | Machinery gene |
| GE023_RS00865 (GE023_000865) | - | 137784..138980 (+) | 1197 | WP_093998734.1 | acetate kinase | - |
| GE023_RS00870 (GE023_000870) | - | 139300..139506 (+) | 207 | WP_003046200.1 | helix-turn-helix transcriptional regulator | - |
| GE023_RS00875 (GE023_000875) | - | 139507..139647 (+) | 141 | Protein_126 | CPBP family glutamic-type intramembrane protease | - |
| GE023_RS10810 | - | 139772..139927 (+) | 156 | WP_236493542.1 | hypothetical protein | - |
| GE023_RS00885 (GE023_000885) | proC | 140233..141009 (-) | 777 | WP_159305271.1 | pyrroline-5-carboxylate reductase | - |
| GE023_RS00890 (GE023_000890) | pepA | 141057..142124 (-) | 1068 | WP_003046205.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35915.02 Da Isoelectric Point: 4.7866
>NTDB_id=447141 GE023_RS00860 WP_003046195.1 136772..137725(+) (comYH) [Streptococcus canis strain HL_98_2]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNIDKLKALCLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDTIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEVMDSS
AHFIQEDAVRPQLLKESDVVISDLPVGYYPNDAIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKHWLKGYAQVVALITLPDTIFGHPSNAKSIIVLQKQTDRPMETFVYPIRDLKLAENIHALMDNFKKWKLDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNIDKLKALCLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDTIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEVMDSS
AHFIQEDAVRPQLLKESDVVISDLPVGYYPNDAIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKHWLKGYAQVVALITLPDTIFGHPSNAKSIIVLQKQTDRPMETFVYPIRDLKLAENIHALMDNFKKWKLDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=447141 GE023_RS00860 WP_003046195.1 136772..137725(+) (comYH) [Streptococcus canis strain HL_98_2]
ATGAATTTTGAAAAAATTGAAGAAGCTTATCAGTTGCTTTTAGAGAATAGCCAACTGATTGAAAATGACTTAAAAACCCA
TATTTATGATGCCATTGTTGAACAAAATTCCTTTTATTTAGGGGCAGAGGGAGCCAGTCCTCAGGTGGCTCAAAACATTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGCAGAGCCTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAACAACTGCAAGCCAACCATCAGTTCACACCAGATACTATTGGTTTTATTCTTCTCTATCTGTTGGAACAATTGAGCGA
TAAAGATAGCTTAGAGGTGCTTGAAATTGGGAGTGGAACAGGGAACCTAGCTCAAACCCTTCTCAACAACACGAGCAAGT
CTCTTGATTATGTAGGAATTGAACTTGATGATCTCTTGATTGATTTGTCAGCCAGCATTGCAGAGGTGATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGACCTCAATTATTGAAAGAAAGTGATGTTGTCATCAGTGACTTACCAGTTGG
CTATTATCCTAACGATGCTATTGCCAAACGTTACAAGGTGGCTAGTTCAGATGAGCATACGTATGCTCACCATTTATTAA
TGGAACAGTCTCTAAAATACTTGAAAAAAGATGGCTTTGCTATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACATTGGTTAAAAGGATATGCTCAGGTGGTGGCTCTAATTACTCTACCAGACACCATTTTTGGTCA
TCCATCCAATGCCAAGTCTATTATTGTCTTGCAAAAACAAACAGACCGCCCAATGGAAACCTTTGTTTATCCAATTCGGG
ACTTGAAACTTGCAGAGAATATTCATGCTCTTATGGATAATTTCAAAAAGTGGAAACTGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCTTATCAGTTGCTTTTAGAGAATAGCCAACTGATTGAAAATGACTTAAAAACCCA
TATTTATGATGCCATTGTTGAACAAAATTCCTTTTATTTAGGGGCAGAGGGAGCCAGTCCTCAGGTGGCTCAAAACATTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGCAGAGCCTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAACAACTGCAAGCCAACCATCAGTTCACACCAGATACTATTGGTTTTATTCTTCTCTATCTGTTGGAACAATTGAGCGA
TAAAGATAGCTTAGAGGTGCTTGAAATTGGGAGTGGAACAGGGAACCTAGCTCAAACCCTTCTCAACAACACGAGCAAGT
CTCTTGATTATGTAGGAATTGAACTTGATGATCTCTTGATTGATTTGTCAGCCAGCATTGCAGAGGTGATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGACCTCAATTATTGAAAGAAAGTGATGTTGTCATCAGTGACTTACCAGTTGG
CTATTATCCTAACGATGCTATTGCCAAACGTTACAAGGTGGCTAGTTCAGATGAGCATACGTATGCTCACCATTTATTAA
TGGAACAGTCTCTAAAATACTTGAAAAAAGATGGCTTTGCTATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACATTGGTTAAAAGGATATGCTCAGGTGGTGGCTCTAATTACTCTACCAGACACCATTTTTGGTCA
TCCATCCAATGCCAAGTCTATTATTGTCTTGCAAAAACAAACAGACCGCCCAATGGAAACCTTTGTTTATCCAATTCGGG
ACTTGAAACTTGCAGAGAATATTCATGCTCTTATGGATAATTTCAAAAAGTGGAAACTGGATAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.772 |
99.685 |
0.666 |
| comYH | Streptococcus mutans UA159 |
66.456 |
99.685 |
0.662 |