Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   ASU2_RS03555 Genome accession   NC_018690
Coordinates   742402..743355 (-) Length   317 a.a.
NCBI ID   WP_014991440.1    Uniprot ID   A0ABT1WUG3
Organism   Actinobacillus suis H91-0380     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 737402..748355
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ASU2_RS03525 (ASU2_03475) - 737612..737833 (+) 222 WP_014991434.1 sulfurtransferase TusA family protein -
  ASU2_RS03530 (ASU2_03480) - 737899..738504 (-) 606 WP_014991435.1 TIGR04211 family SH3 domain-containing protein -
  ASU2_RS03535 (ASU2_03485) - 738572..739834 (-) 1263 WP_014991436.1 inorganic phosphate transporter -
  ASU2_RS03540 (ASU2_03490) - 739851..740531 (-) 681 WP_014991437.1 TIGR00153 family protein -
  ASU2_RS03545 (ASU2_03495) - 740704..741462 (-) 759 WP_014991438.1 iron ABC transporter ATP-binding protein -
  ASU2_RS03550 (ASU2_03500) - 741465..742409 (-) 945 WP_014991439.1 iron chelate uptake ABC transporter family permease subunit -
  ASU2_RS03555 (ASU2_03505) ceuB 742402..743355 (-) 954 WP_014991440.1 ABC transporter permease Machinery gene
  ASU2_RS03560 (ASU2_03510) - 743403..744311 (-) 909 WP_014991441.1 siderophore ABC transporter substrate-binding protein -
  ASU2_RS03565 (ASU2_03515) - 744503..745966 (+) 1464 WP_014991442.1 replicative DNA helicase -
  ASU2_RS03570 (ASU2_03520) - 745956..746243 (+) 288 WP_014991443.1 YcgL domain-containing protein -
  ASU2_RS03575 (ASU2_03525) nrdR 746243..746692 (+) 450 WP_005622941.1 transcriptional regulator NrdR -
  ASU2_RS03580 (ASU2_03530) lysC 746794..748146 (-) 1353 WP_014991444.1 lysine-sensitive aspartokinase 3 -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 34324.30 Da        Isoelectric Point: 9.1641

>NTDB_id=44708 ASU2_RS03555 WP_014991440.1 742402..743355(-) (ceuB) [Actinobacillus suis H91-0380]
MFSLTQFSFFSLLILSLLSMSVGVADFHWSALLSDPEQTQLFFISRLPRTLAIILVGATLSVAGMVLQIVLKNRFIEPSM
IGASQSAALGVLAISLIFPAAPLVAKMSFATCCALIGMGIFMLLLRNLPPHQKLMVPLIGIVFGNIIEAITTFIAYETDS
LQLLSIWFSGDFSGVLAGRYELLWLTAALSIVIYIMADQLSITGLGHNISTSLGINYRRMTWLALITVALITAVVVVTIG
QIPFIGLVVPNIVSRLAGDRLRKNLPAVVLLGANLVLVCDIIGRVINAPYEVPISTIFGICGTVVFLYLLFRGKRHA

Nucleotide


Download         Length: 954 bp        

>NTDB_id=44708 ASU2_RS03555 WP_014991440.1 742402..743355(-) (ceuB) [Actinobacillus suis H91-0380]
ATGTTTTCACTTACTCAATTTAGTTTTTTTTCGCTTTTAATTCTCAGTTTACTGAGTATGTCTGTGGGTGTAGCCGACTT
TCATTGGTCGGCTTTATTATCTGATCCAGAACAAACACAACTGTTTTTTATCAGTCGTCTTCCTCGTACCCTTGCCATTA
TATTAGTCGGTGCAACTTTAAGTGTTGCTGGCATGGTATTACAAATCGTTTTAAAAAATCGTTTTATTGAACCGAGTATG
ATTGGAGCAAGCCAAAGTGCCGCTCTTGGTGTATTAGCTATCAGTCTGATTTTTCCTGCCGCTCCACTTGTCGCGAAAAT
GTCGTTTGCCACTTGTTGCGCATTAATCGGTATGGGCATTTTTATGCTGTTGCTACGTAATCTTCCCCCTCATCAAAAAC
TCATGGTGCCACTAATCGGTATTGTATTCGGCAATATTATTGAAGCAATTACGACCTTTATCGCTTACGAAACCGACTCA
TTACAACTTTTATCTATTTGGTTTTCCGGTGATTTTTCCGGAGTTTTAGCCGGTCGCTATGAACTATTATGGCTTACTGC
CGCACTCTCTATCGTGATCTATATCATGGCGGATCAACTGAGTATTACCGGACTAGGACACAATATTAGCACTAGCCTTG
GTATTAATTATCGCCGAATGACATGGCTTGCCTTAATTACTGTTGCACTTATTACGGCAGTTGTTGTTGTGACCATCGGG
CAAATTCCCTTTATCGGTTTAGTCGTACCAAATATTGTCTCTCGTCTAGCAGGTGATAGATTGCGTAAAAATCTCCCCGC
GGTCGTATTACTTGGTGCGAATCTTGTATTAGTTTGTGACATCATTGGCAGAGTTATTAATGCCCCTTATGAAGTACCGA
TTTCCACTATTTTCGGTATTTGCGGTACTGTTGTATTCCTCTATTTATTATTTAGAGGGAAGCGTCATGCGTAA

Domains


Predicted by InterProScan.

(12-312)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

37.785

96.845

0.366


Multiple sequence alignment