Detailed information NTG0447020

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: I5V48_RS06955
• Genome accession: NZ_CP065430
• Coordinates: 1425995..1429261 (-)
• Length: 1088 a.a.
• NCBI ID: WP_043027246.1
• Uniprot ID: -
• Organism: Streptococcus suis strain YZDH1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1420995..1434261

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I5V48_RS06950 (I5V48_06950)	rexA	1422342..1425995 (-)	3654	WP_043034014.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
I5V48_RS06955 (I5V48_06955)	rexB	1425995..1429261 (-)	3267	WP_043027246.1	ATP-dependent nuclease subunit B	Machinery gene
I5V48_RS12345	-	1429423..1432411 (-)	2989	Protein_1360	MucBP domain-containing protein	-

Sequence

Protein

• Length: 1088 a.a.
• Molecular weight: 124532.95 Da
• Isoelectric Point: 5.2450

>NTDB_id=447020 I5V48_RS06955 WP_043027246.1 1425995..1429261(-) (rexB) [Streptococcus suis strain YZDH1]
MKLVHTDIRNPLTQHLTDTSAEFAKQGKRVFYIAPNSLSFEMERKVLEYLPEQATFDIIVTRFGQLARYLMIDKVENGLP
LDDVGLAMIFFRVLSQFEDGDLKVYGRLQTDFGFINQLVALYKELQRANMSILDLEAMDSPDKQADLVKIFLAVTDILSK
EGFEHQSKLAQLTRLVETGQLDEQLKNIVLVVDGFSRFSAEEEALVRALNERVSEILIGVYASKKAVQATYVEGNVYQAN
VDFLRQLSAQFQTKATCIGQEPVLDSIGKFSKNMESIYDYSGTLLELTPADQEKIQLWEVVNQKEEVEQVATAIRQHVHQ
GARYKDILLLLGDVDSYKLQIGKIFDKYDIPYYFGKAEEMSHHPLVHFVESLERLRRYRFRAEDLLNLLKSGLYASISPK
ELDLFESYILFADMKGQAAFSRAFSVNGRADYDAEVIKEKRLVYDLNVLEPLRAKIMEPLNQLFKAGPQSGVALLEKFMA
FLEAIELPKNMEKMSRNLSEVEQEKEEQVWKSFTHILENFYQIFGKEKLKMDDFLTILQAGMQASHYRTVPATVDVVNVK
SYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEKVNLVSASSSCFDLVSRENIKKNHAAMMSLLNSATEQLVIS
TPQIYNEGEDSLSPYIKILQKMGLKSEERGRIKSFSPQDIGHYKSLLSRLIESERPSLDHEEWEGQRAFWTVLVRHLKKK
LESQGIEIPTITGELTSKQLSDETLAALYPEDKPLNLSASSLTNFYNNQYLYFVRNVLRLREQESIHPTAFQHGLFLHRI
FERVVMDQSELDFDQKVDKAILRTRDEAEFAMFYNQDADARYTEEVLDKIVRSSATILRDNDLVEIDGQEKSFRQDKALV
FDLQNGKSVHVNGTIDRLDTLQINQAVGVVDYKSSDQSFSVGDFYNGLKPQLVTYLAALQELDETKDKPVFGAMYLHLQD
PIIKLKDTKNLEQLEGAANTSLVYKGLFLKEESLGLNHFYQTRNQLYTEDEFAVLLNHNQELYKQAAKDILAGRFAINPY
TKDGRSVAGEQLKAITGFEADRHMGMARRLVKEAKRQDWMERMKGGQD

Nucleotide

• Length: 3267 bp

>NTDB_id=447020 I5V48_RS06955 WP_043027246.1 1425995..1429261(-) (rexB) [Streptococcus suis strain YZDH1]
ATGAAATTAGTCCATACAGATATTCGCAATCCTCTGACACAGCATTTAACGGATACCTCGGCAGAATTTGCCAAGCAAGG
CAAACGTGTTTTTTATATTGCTCCGAACTCCCTGTCCTTTGAAATGGAACGTAAAGTCTTGGAATACCTGCCTGAACAGG
CAACTTTTGATATTATCGTGACCCGTTTTGGGCAATTGGCCCGATACCTAATGATTGACAAGGTTGAAAACGGTCTGCCA
CTGGATGATGTTGGTCTGGCCATGATTTTCTTTCGTGTTCTATCGCAATTTGAAGATGGCGACTTGAAAGTCTATGGTCG
TTTGCAGACAGATTTTGGTTTCATTAACCAGCTAGTTGCTTTATACAAAGAATTGCAACGGGCAAATATGTCTATTTTGG
ACTTGGAAGCCATGGACTCACCAGATAAGCAGGCTGATTTGGTAAAGATTTTTCTGGCTGTAACAGACATTTTGTCCAAA
GAAGGCTTTGAGCATCAGTCTAAGTTAGCACAGCTGACTCGCTTGGTGGAAACTGGTCAGTTGGATGAGCAGTTGAAGAA
CATTGTACTGGTGGTAGACGGATTTTCTCGTTTTTCGGCAGAAGAAGAAGCTTTAGTAAGAGCTTTAAATGAACGAGTGT
CGGAAATCCTGATTGGTGTATATGCCAGCAAGAAAGCTGTGCAAGCCACCTATGTGGAAGGCAATGTCTATCAAGCCAAC
GTTGATTTTTTACGTCAGCTATCAGCGCAGTTCCAGACTAAGGCAACTTGTATTGGTCAAGAGCCAGTCTTGGACAGTAT
TGGAAAATTTTCAAAGAATATGGAGTCGATTTATGATTATAGCGGAACTTTACTTGAGTTGACTCCAGCTGACCAAGAAA
AAATCCAGCTATGGGAAGTCGTTAACCAAAAAGAAGAGGTAGAGCAGGTTGCGACTGCAATTCGTCAGCATGTGCATCAA
GGGGCTCGCTATAAAGACATCTTGTTGCTCTTGGGTGATGTGGATAGCTACAAGTTGCAGATTGGCAAGATTTTTGACAA
GTATGATATTCCTTACTATTTTGGTAAGGCAGAGGAGATGAGTCATCATCCGTTGGTCCATTTTGTGGAGTCCTTGGAAC
GTTTGCGCCGCTATCGTTTCCGAGCGGAAGACCTGCTCAATCTCCTCAAATCTGGTTTGTACGCCAGCATTTCCCCAAAG
GAGCTGGACCTATTTGAGTCTTACATCCTTTTTGCGGATATGAAGGGGCAGGCTGCTTTTTCGAGGGCTTTTTCGGTCAA
TGGCAGAGCAGACTATGATGCTGAAGTCATCAAGGAGAAAAGGCTTGTCTATGATTTGAATGTTTTGGAACCCCTACGTG
CTAAGATTATGGAGCCTTTGAACCAGTTGTTTAAGGCTGGACCACAATCTGGAGTTGCCTTGCTTGAGAAATTTATGGCA
TTTTTGGAGGCAATTGAGCTTCCTAAAAATATGGAAAAAATGTCTCGAAATTTGAGTGAAGTAGAGCAAGAAAAAGAAGA
GCAGGTCTGGAAAAGTTTTACCCATATTCTAGAGAATTTTTATCAGATTTTCGGAAAAGAAAAGTTGAAAATGGATGATT
TTCTGACTATTTTACAGGCTGGAATGCAGGCCAGTCACTATCGCACCGTTCCTGCAACAGTTGATGTGGTCAATGTCAAA
TCCTATGATTTGATCGAGCCGCACACTGCAAAGTATGTTTATGCTATCGGAATGGGACAGTCCAATTTTCCAAAAGTTGC
CAAGAATACCAGTCTATTAACAGAAGAAGAGATGGAAAAAGTCAATCTAGTTTCAGCTAGTTCTTCATGTTTCGATTTGG
TCAGTCGAGAGAATATCAAGAAGAACCATGCTGCTATGATGTCTTTGCTTAATTCTGCGACAGAACAGTTAGTTATTTCT
ACTCCTCAGATTTATAACGAAGGTGAAGATAGTCTCTCCCCTTATATCAAGATTCTCCAAAAAATGGGGCTGAAATCCGA
AGAACGTGGACGGATTAAAAGTTTTAGTCCGCAAGACATCGGTCACTACAAGAGTCTCTTATCCCGTTTGATTGAGTCGG
AAAGACCATCTCTTGATCATGAAGAATGGGAAGGGCAGAGGGCCTTCTGGACAGTCTTGGTTCGCCATTTGAAGAAGAAA
TTGGAGTCGCAAGGCATTGAAATTCCGACCATTACTGGCGAACTTACTTCTAAACAACTTTCAGATGAAACCTTGGCTGC
TTTATATCCAGAGGATAAGCCGCTCAATCTTTCTGCATCCAGCTTGACCAATTTCTACAATAACCAATATCTTTACTTTG
TCCGTAATGTTCTTCGCTTGCGGGAACAGGAATCCATCCATCCGACTGCCTTTCAGCATGGTTTGTTCTTGCATCGGATT
TTTGAACGAGTGGTCATGGACCAATCTGAGCTAGATTTTGATCAAAAAGTGGACAAGGCCATCCTGCGTACGCGTGACGA
GGCAGAATTTGCTATGTTTTATAACCAGGATGCGGATGCTCGTTATACGGAGGAGGTGCTGGATAAGATTGTTCGTTCCA
GTGCGACTATTTTGCGGGATAATGATTTGGTTGAAATAGATGGTCAGGAAAAGAGTTTCCGTCAGGATAAGGCGCTGGTT
TTTGACCTTCAAAATGGCAAGAGTGTGCATGTAAATGGTACCATTGACCGCTTGGATACCTTACAAATCAATCAGGCTGT
CGGTGTTGTGGATTACAAGTCCAGTGACCAATCTTTTTCAGTTGGGGATTTTTACAATGGTCTCAAACCTCAGTTGGTAA
CCTACTTGGCAGCCTTGCAAGAGTTGGATGAAACCAAGGATAAACCTGTTTTTGGAGCTATGTATTTGCATTTGCAGGAT
CCGATTATCAAATTAAAAGACACGAAGAATTTAGAACAGCTAGAAGGAGCTGCCAATACGAGCTTGGTTTACAAGGGGCT
TTTCTTGAAGGAGGAAAGTCTGGGGCTCAATCATTTTTATCAGACTCGTAACCAACTCTACACGGAAGATGAGTTTGCGG
TGTTATTGAACCACAACCAAGAACTATACAAACAAGCTGCCAAGGACATCCTGGCTGGTCGCTTTGCTATTAACCCTTAT
ACCAAAGATGGGCGTTCGGTGGCAGGTGAGCAGCTGAAGGCAATCACTGGTTTTGAGGCGGATCGGCACATGGGCATGGC
GCGGCGGTTGGTCAAAGAGGCCAAGCGTCAAGATTGGATGGAACGAATGAAAGGAGGTCAGGACTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (757-1042)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	44.696	100	0.453