Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   HPQ66_RS11275 Genome accession   NZ_CP053764
Coordinates   2402325..2403125 (-) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis strain B268     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2397325..2408125
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HPQ66_RS11245 (HPQ66_11285) - 2397872..2398504 (+) 633 WP_014418348.1 helix-turn-helix domain-containing protein -
  HPQ66_RS11250 (HPQ66_11290) - 2398795..2398932 (+) 138 WP_014470646.1 hypothetical protein -
  HPQ66_RS11255 (HPQ66_11295) - 2399026..2400144 (+) 1119 WP_003153184.1 NADH-dependent flavin oxidoreductase -
  HPQ66_RS11260 (HPQ66_11300) - 2400271..2400483 (+) 213 WP_223883535.1 spore germination protein -
  HPQ66_RS11265 (HPQ66_11305) - 2400610..2400822 (+) 213 WP_014305392.1 spore germination protein -
  HPQ66_RS11270 (HPQ66_11310) alr 2400996..2402177 (+) 1182 WP_077722582.1 alanine racemase -
  HPQ66_RS11275 (HPQ66_11315) spo0A 2402325..2403125 (-) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  HPQ66_RS11280 (HPQ66_11320) spoIVB 2403406..2404686 (-) 1281 WP_007408360.1 SpoIVB peptidase -
  HPQ66_RS11285 (HPQ66_11325) recN 2404850..2406580 (-) 1731 WP_172614817.1 DNA repair protein RecN Machinery gene
  HPQ66_RS11290 (HPQ66_11330) argR 2406612..2407061 (-) 450 WP_003153173.1 transcriptional regulator ArgR -
  HPQ66_RS11295 (HPQ66_11335) - 2407158..2408003 (-) 846 WP_003153172.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=446986 HPQ66_RS11275 WP_003153177.1 2402325..2403125(-) (spo0A) [Bacillus velezensis strain B268]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=446986 HPQ66_RS11275 WP_003153177.1 2402325..2403125(-) (spo0A) [Bacillus velezensis strain B268]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCCGATGTGCTCG
TGTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGTGAATCAGAGCTTGAGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTAGGCGCATCCTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCGC
CGTCCGCGCAAAGCAGCATTATCCGCAGCCAGCCGGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTTCACTGTTCGGGTATACGGTAAGC
ATGACAAAAGCAAAACCAACCAACTCGGAGTTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97