Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   HPQ66_RS06900 Genome accession   NZ_CP053764
Coordinates   1362948..1363412 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain B268     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1357948..1368412
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HPQ66_RS06880 (HPQ66_06900) - 1358429..1360248 (+) 1820 Protein_1307 PAS domain-containing protein -
  HPQ66_RS06885 (HPQ66_06905) - 1360274..1361443 (-) 1170 WP_007611083.1 aminotransferase A -
  HPQ66_RS06890 (HPQ66_06910) - 1361644..1361805 (-) 162 WP_003154625.1 hypothetical protein -
  HPQ66_RS06895 (HPQ66_06915) cheV 1361994..1362905 (+) 912 WP_003154623.1 chemotaxis protein CheV -
  HPQ66_RS06900 (HPQ66_06920) kre 1362948..1363412 (-) 465 WP_003154622.1 YkyB family protein Regulator
  HPQ66_RS06905 (HPQ66_06925) - 1363535..1364827 (-) 1293 WP_172614648.1 MFS transporter -
  HPQ66_RS06910 (HPQ66_06930) - 1364903..1365397 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  HPQ66_RS06915 (HPQ66_06935) - 1365472..1366335 (-) 864 WP_077722139.1 metallophosphoesterase -
  HPQ66_RS06920 (HPQ66_06940) fadH 1366479..1367243 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  HPQ66_RS06925 (HPQ66_06945) - 1367354..1367902 (+) 549 WP_172614649.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=446977 HPQ66_RS06900 WP_003154622.1 1362948..1363412(-) (kre) [Bacillus velezensis strain B268]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=446977 HPQ66_RS06900 WP_003154622.1 1362948..1363412(-) (kre) [Bacillus velezensis strain B268]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929