Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   HPQ66_RS05565 Genome accession   NZ_CP053764
Coordinates   1112995..1113948 (+) Length   317 a.a.
NCBI ID   WP_007409125.1    Uniprot ID   A7Z3B8
Organism   Bacillus velezensis strain B268     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1107995..1118948
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HPQ66_RS05540 (HPQ66_05550) argF 1109813..1110784 (+) 972 WP_007409130.1 ornithine carbamoyltransferase -
  HPQ66_RS05545 (HPQ66_05555) - 1110860..1111039 (+) 180 WP_003155070.1 YjzC family protein -
  HPQ66_RS05550 (HPQ66_05560) - 1111076..1111261 (-) 186 WP_007409129.1 YjzD family protein -
  HPQ66_RS05555 (HPQ66_05565) - 1111522..1112256 (+) 735 WP_025284552.1 hypothetical protein -
  HPQ66_RS05560 (HPQ66_05570) - 1112339..1112905 (+) 567 WP_069006907.1 hypothetical protein -
  HPQ66_RS05565 (HPQ66_05575) med 1112995..1113948 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  HPQ66_RS05570 (HPQ66_05580) comZ 1113961..1114152 (+) 192 WP_007409124.1 ComZ family protein Regulator
  HPQ66_RS05575 (HPQ66_05585) - 1114181..1114399 (-) 219 WP_007409123.1 hypothetical protein -
  HPQ66_RS05580 (HPQ66_05590) - 1114566..1115504 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  HPQ66_RS05585 (HPQ66_05595) fabF 1115527..1116765 (+) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  HPQ66_RS05590 (HPQ66_05600) - 1116849..1117634 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  HPQ66_RS05595 (HPQ66_05605) - 1117808..1118794 (+) 987 WP_029325950.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35342.99 Da        Isoelectric Point: 4.6686

>NTDB_id=446969 HPQ66_RS05565 WP_007409125.1 1112995..1113948(+) (med) [Bacillus velezensis strain B268]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=446969 HPQ66_RS05565 WP_007409125.1 1112995..1113948(+) (med) [Bacillus velezensis strain B268]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACTATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTCGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z3B8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.549

100

0.785