Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FX982_RS06255 Genome accession   NZ_CP053746
Coordinates   1365831..1366241 (-) Length   136 a.a.
NCBI ID   WP_065991170.1    Uniprot ID   -
Organism   Pseudomonas graminis strain PgKB30     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1360831..1371241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FX982_RS06240 (FX982_01256) - 1362753..1364789 (-) 2037 WP_122536408.1 methyl-accepting chemotaxis protein -
  FX982_RS06245 (FX982_01257) - 1364864..1365403 (-) 540 WP_172610016.1 chemotaxis protein CheW -
  FX982_RS06250 (FX982_01258) pilH 1365420..1365785 (-) 366 WP_065991171.1 twitching motility response regulator PilH -
  FX982_RS06255 (FX982_01259) pilG 1365831..1366241 (-) 411 WP_065991170.1 twitching motility response regulator PilG Regulator
  FX982_RS06260 (FX982_01260) gshB 1366483..1367439 (+) 957 WP_122536406.1 glutathione synthase -
  FX982_RS06265 (FX982_01261) - 1367612..1368514 (+) 903 WP_172610017.1 energy transducer TonB -
  FX982_RS06270 (FX982_01262) - 1368622..1369191 (+) 570 WP_172610018.1 YqgE/AlgH family protein -
  FX982_RS06275 (FX982_01263) ruvX 1369191..1369628 (+) 438 WP_172610019.1 Holliday junction resolvase RuvX -
  FX982_RS06280 (FX982_01264) pyrR 1369705..1370226 (+) 522 WP_172610020.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15072.58 Da        Isoelectric Point: 8.5290

>NTDB_id=446815 FX982_RS06255 WP_065991170.1 1365831..1366241(-) (pilG) [Pseudomonas graminis strain PgKB30]
MEQHSAPLKVMVIDDSRTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAVEQQLS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=446815 FX982_RS06255 WP_065991170.1 1365831..1366241(-) (pilG) [Pseudomonas graminis strain PgKB30]
ATGGAACAGCATTCAGCCCCATTGAAAGTGATGGTCATCGACGACTCCCGAACGATTCGTCGCACCGCCGAGACGCTGCT
GAAAAACGTCGGCTGTGAAGTGATCACCGCCATCGACGGCTTCGACGCACTGGCCAAGATTGCCGACAATCATCCCAGAA
TCATTTTCGTCGACATCATGATGCCCAGGCTCGACGGGTATCAGACGTGCGCGTTGATCAAGAACAATCGGGCGTTCAAA
TCCACGCCGGTGATCATGTTGTCCTCAAGGGACGGGCTCTTCGACAAGGCCAAGGGGCGCATCGTCGGTTCCGATCAGTT
TTTGACCAAACCGTTCAGCAAGGAAGAACTGCTCAGTGCGATCAAGGCCCATGTGCCCGGGTTCGTTGCAGTCGAACAAC
AACTATCTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.6

91.912

0.676