Detailed information NTG0446810

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: HPY04_RS16980
• Genome accession: NZ_CP053745
• Coordinates: 692587..693681 (-)
• Length: 364 a.a.
• NCBI ID: WP_175249518.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain SA3G
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 687587..698681

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPY04_RS16960 (HPY04_16980)	-	687969..688367 (+)	399	WP_000831416.1	YgiW/YdeI family stress tolerance OB fold protein	-
HPY04_RS16965 (HPY04_16985)	-	688618..689136 (+)	519	WP_000914961.1	hypothetical protein	-
HPY04_RS16970 (HPY04_16990)	-	689339..690004 (+)	666	WP_000268198.1	flagellar brake protein	-
HPY04_RS16975 (HPY04_16995)	luxQ	689996..692569 (-)	2574	WP_001026301.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
HPY04_RS16980 (HPY04_17000)	luxP	692587..693681 (-)	1095	WP_175249518.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
HPY04_RS16985 (HPY04_17005)	traF	693893..695053 (-)	1161	WP_001025858.1	conjugal transfer protein TraF	-
HPY04_RS16990 (HPY04_17010)	-	695155..695460 (-)	306	WP_000448831.1	GIY-YIG nuclease family protein	-
HPY04_RS16995 (HPY04_17015)	-	695460..696110 (-)	651	WP_175249519.1	YceH family protein	-
HPY04_RS17000 (HPY04_17020)	-	696152..696349 (-)	198	WP_001246071.1	hypothetical protein	-
HPY04_RS17005 (HPY04_17025)	-	696537..696857 (+)	321	WP_001089529.1	DUF496 family protein	-
HPY04_RS17010 (HPY04_17030)	-	697270..697521 (+)	252	WP_001882582.1	YgjV family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41224.87 Da
• Isoelectric Point: 6.3129

>NTDB_id=446810 HPY04_RS16980 WP_175249518.1 692587..693681(-) (luxP) [Vibrio cholerae strain SA3G]
MKRKLISPLFLIAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSVLTVAQEQPVIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEYGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKSVPLVYSGDFEVVTKQDSAARIAELKARAFRYSDR

Nucleotide

• Length: 1095 bp

>NTDB_id=446810 HPY04_RS16980 WP_175249518.1 692587..693681(-) (luxP) [Vibrio cholerae strain SA3G]
ATGAAAAGAAAGCTAATATCTCCGCTGTTTCTGATAGCAGCACTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGTGTGTTGACGGTGGCGCAAGAACAACCCGTTATTATTTCGGTGGTCTATCCCGGACAGCAAATTTCCGAC
TATTGGGTTCGCAATATCAAAGCGTTTGAAAAGCGAATGGACGCTTTGGGGATTCGCTATCAAATCAATCAGGTGTTTAC
TCGCCCAAATCTTGATACTCGCCAGCAGAGTGTTTCCTTGATGGAAGCGCTGAAAAATAAGAGCGATTATCTGATTTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAGCATGTGCTGCACTCCTCCGAAACGAAACTGATTTTGCAAAACATC
ACGACGCCAGTCAAAGATTGGCAAGGCAAGCAGCCCATGATGTACATCGGTTTTGATCATGAGTACGGTGCGCAATTATT
GGCGCAATATTACCAAGCACATGCCCCGAAAAAGCCGTACTCAGTACTTTATTTTTCCGAGGGGTATATCAGTGAAGCGC
GGGGAGACACCTTCATTCAAGATATGAACGCGGTGCACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACCCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
CGCTTTGGGAGCTGCGCAGGCACTGAAAGAGCTGAATCGACAAGATATTCTGGTCAATGGTTGGGGAGGCGGCTCGGCAG
AGCTTGAAGCGCTTGCCAAAGGAGAATTGGATGTCACTGTGATGCGTATGAATGACGATACGGGTGTGGCGATGGCTGAA
GCGATTAAATGGGATTTGGAAGGGAAATCCGTACCTTTGGTCTATTCAGGCGATTTTGAAGTGGTCACCAAACAAGATTC
AGCAGCACGTATTGCAGAACTGAAAGCTCGGGCTTTCCGTTATTCGGATCGTTAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-323)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	99.725	100	0.997