Detailed information NTG0044681

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPELS_RS07580
• Genome accession: NC_017063
• Coordinates: 1577623..1579062 (-)
• Length: 479 a.a.
• NCBI ID: WP_000748956.1
• Uniprot ID: -
• Organism: Helicobacter pylori ELS37
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1572623..1584062

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPELS_RS07555 (HPELS_07840)	recG	1573755..1575626 (-)	1872	WP_001158407.1	ATP-dependent DNA helicase RecG	-
HPELS_RS07560 (HPELS_07845)	-	1575708..1576055 (+)	348	WP_000836992.1	hypothetical protein	-
HPELS_RS07565 (HPELS_07850)	-	1576059..1576694 (+)	636	WP_000668078.1	outer membrane protein	-
HPELS_RS07570 (HPELS_07855)	-	1576691..1577443 (-)	753	WP_000767547.1	exodeoxyribonuclease III	-
HPELS_RS07580 (HPELS_07860)	comH	1577623..1579062 (-)	1440	WP_000748956.1	hypothetical protein	Machinery gene
HPELS_RS07590 (HPELS_07865)	dnaA	1579283..1580656 (-)	1374	WP_000380664.1	chromosomal replication initiator protein DnaA	-
HPELS_RS07595 (HPELS_07870)	-	1580811..1581353 (+)	543	WP_000922984.1	hypothetical protein	-
HPELS_RS07600 (HPELS_07875)	-	1581398..1581637 (+)	240	WP_000461841.1	DUF2443 family protein	-
HPELS_RS07605 (HPELS_07880)	glmS	1581638..1583431 (+)	1794	WP_000334430.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54748.74 Da
• Isoelectric Point: 7.0006

>NTDB_id=44681 HPELS_RS07580 WP_000748956.1 1577623..1579062(-) (comH) [Helicobacter pylori ELS37]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHSNPIPSLNAPMQKPQNKPHSSQQSPQNFSYPESKLGFKNSKNSLLQPL
VTPSKVSPTNEVKTPTNDAKPPLKHSSEDQENNLFVAPPTEKTLPSNTPNTDASESNENNENRDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRIDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLMKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=44681 HPELS_RS07580 WP_000748956.1 1577623..1579062(-) (comH) [Helicobacter pylori ELS37]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCACATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCCAAAGAACCCAAACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTCTCTTTAGAAACGACCCTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAGGA
ATTAAAAGAATCGCACTCAAACCCAATACCTTCTTTAAACGCACCCATGCAAAAACCACAAAACAAACCCCATTCATCGC
AACAATCCCCTCAAAACTTTTCCTATCCAGAATCCAAACTAGGCTTTAAAAACTCTAAAAACAGCCTTTTACAGCCCTTA
GTAACTCCTAGCAAAGTAAGCCCCACTAATGAAGTTAAAACGCCAACAAACGACGCCAAACCCCCTTTAAAACATTCTTC
AGAAGATCAAGAAAACAACCTCTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAGTAACACTCCTAACACTGATGCGA
GTGAAAGCAATGAAAATAACGAAAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCTAATATCAAAGAATTCGCG
TGCGGGAAGTGGGTTTATGACGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCATTGATAAAGATAAAGA
AGTTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAACAATTTTGCGATTCTCCAAGCCAGA
AGCTCTACAGAAAAATGTAAAAGGGCTAGAGCAAGAAAAGACGGCACAACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAAAGCGAGTATGAAATCACCACGCAATTAATGAAAGCCATTTATGAACGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAAGGGCATTATTTAAACGATATAGTCAAAGAGAGCAGTGA
ATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAGCCACGAG
CTAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.693	100	0.927