Detailed information NTG0446766

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: HPY04_RS01165
• Genome accession: NZ_CP053744
• Coordinates: 251764..252771 (+)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: A0A085RG68
• Organism: Vibrio cholerae strain SA3G
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 246764..257771

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPY04_RS01145 (HPY04_01145)	metJ	246769..247086 (+)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-
HPY04_RS01150 (HPY04_01150)	-	247196..248473 (-)	1278	WP_001278586.1	malic enzyme-like NAD(P)-binding protein	-
HPY04_RS01155 (HPY04_01155)	rpmE	248781..248999 (-)	219	WP_175248672.1	50S ribosomal protein L31	-
HPY04_RS01160 (HPY04_01160)	priA	249254..251458 (+)	2205	WP_001247903.1	primosomal protein N'	-
HPY04_RS01165 (HPY04_01165)	cytR	251764..252771 (+)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
HPY04_RS01170 (HPY04_01170)	-	252943..253494 (+)	552	WP_001914589.1	SPOR domain-containing protein	-
HPY04_RS01175 (HPY04_01175)	hslV	253631..254188 (+)	558	WP_000208249.1	ATP-dependent protease subunit HslV	-
HPY04_RS01180 (HPY04_01180)	hslU	254254..255585 (+)	1332	WP_057642155.1	HslU--HslV peptidase ATPase subunit	-
HPY04_RS01185 (HPY04_01185)	-	255689..256606 (+)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
HPY04_RS01190 (HPY04_01190)	rraA	256681..257196 (+)	516	WP_000456236.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=446766 HPY04_RS01165 WP_000224452.1 251764..252771(+) (cytR) [Vibrio cholerae strain SA3G]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=446766 HPY04_RS01165 WP_000224452.1 251764..252771(+) (cytR) [Vibrio cholerae strain SA3G]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGTAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCCGGTCCACAACA
TGCTGCGCTGTGTCAATTCCGTCATCAAGGCTATCAACAGGCGCTGCGTCGTGCTGGCATCACCATGAACCCGACTTACT
GCACCTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCACAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCTGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTCGAATTATTGCGTGGACATGATGTGCGTGCAGGATCGCGTCTTTTGGAG
ACCAAGCTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A085RG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904