Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   ST1A_RS05375 Genome accession   NZ_CP065384
Coordinates   1031851..1032333 (-) Length   160 a.a.
NCBI ID   WP_011681193.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain 1A     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1026851..1037333
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST1A_RS05355 (ST1A_05335) pepT 1027332..1028555 (-) 1224 WP_046206468.1 peptidase T -
  ST1A_RS05360 (ST1A_05340) lepB 1028763..1029320 (-) 558 WP_011681191.1 signal peptidase I -
  ST1A_RS05365 (ST1A_05345) - 1029443..1030672 (-) 1230 WP_002953086.1 tetratricopeptide repeat protein -
  ST1A_RS05370 (ST1A_05350) - 1030662..1031840 (-) 1179 WP_014608367.1 AI-2E family transporter -
  ST1A_RS05375 (ST1A_05355) mutX 1031851..1032333 (-) 483 WP_011681193.1 8-oxo-dGTP diphosphatase Machinery gene
  ST1A_RS05380 (ST1A_05360) ftsX 1032489..1033418 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  ST1A_RS05385 (ST1A_05365) ftsE 1033411..1034103 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  ST1A_RS05395 (ST1A_05375) queG 1035342..1036460 (-) 1119 WP_002953100.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18885.35 Da        Isoelectric Point: 4.7200

>NTDB_id=446641 ST1A_RS05375 WP_011681193.1 1031851..1032333(-) (mutX) [Streptococcus thermophilus strain 1A]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLESGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=446641 ST1A_RS05375 WP_011681193.1 1031851..1032333(-) (mutX) [Streptococcus thermophilus strain 1A]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAATCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706