Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ST1A_RS02540 Genome accession   NZ_CP065384
Coordinates   473905..474711 (+) Length   268 a.a.
NCBI ID   WP_011680838.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain 1A     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 468905..479711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST1A_RS02520 (ST1A_02510) tuf 469953..471149 (+) 1197 WP_002949971.1 elongation factor Tu -
  ST1A_RS02525 (ST1A_02515) tpiA 471398..472156 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  ST1A_RS02530 (ST1A_02520) tmk 472395..473024 (+) 630 WP_002946312.1 dTMP kinase -
  ST1A_RS02535 (ST1A_02525) - 473033..473908 (+) 876 WP_011225600.1 DNA polymerase III subunit delta' -
  ST1A_RS02540 (ST1A_02530) yaaT 473905..474711 (+) 807 WP_011680838.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  ST1A_RS02545 (ST1A_02535) yabA 474698..475018 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  ST1A_RS02550 (ST1A_02540) rsmI 475021..475887 (+) 867 WP_002949974.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ST1A_RS02555 (ST1A_02545) - 476025..477260 (+) 1236 WP_011680839.1 ammonium transporter -
  ST1A_RS02560 (ST1A_02550) - 477271..477612 (+) 342 WP_011680840.1 P-II family nitrogen regulator -
  ST1A_RS02565 (ST1A_02555) - 477710..478366 (+) 657 WP_011680841.1 glycoside hydrolase family 73 protein -
  ST1A_RS02570 (ST1A_02560) - 478389..479210 (+) 822 WP_011680842.1 Cof-type HAD-IIB family hydrolase -
  ST1A_RS02575 (ST1A_02565) - 479229..479699 (-) 471 Protein_447 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29758.16 Da        Isoelectric Point: 4.5847

>NTDB_id=446626 ST1A_RS02540 WP_011680838.1 473905..474711(+) (yaaT) [Streptococcus thermophilus strain 1A]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=446626 ST1A_RS02540 WP_011680838.1 473905..474711(+) (yaaT) [Streptococcus thermophilus strain 1A]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTTTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.205

98.134

0.414