Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   I5046_RS08990 Genome accession   NZ_CP065355
Coordinates   1877755..1878573 (-) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain JW31330_O1_dhc     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1872755..1883573
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5046_RS08970 (I5046_08970) - 1873848..1874825 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  I5046_RS08975 (I5046_08975) - 1875086..1875922 (-) 837 WP_000886457.1 membrane protein -
  I5046_RS08980 (I5046_08980) - 1875931..1877448 (-) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  I5046_RS08985 (I5046_08985) - 1877463..1877777 (-) 315 WP_000435807.1 YfhH family protein -
  I5046_RS08990 (I5046_08990) recX 1877755..1878573 (-) 819 WP_001124422.1 recombination regulator RecX Regulator
  I5046_RS08995 (I5046_08995) sgtB 1878834..1879643 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  I5046_RS09000 (I5046_09000) - 1879983..1880498 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  I5046_RS09005 (I5046_09005) - 1880628..1880789 (-) 162 WP_001005407.1 SE1561 family protein -
  I5046_RS09010 (I5046_09010) - 1881136..1881216 (+) 81 WP_123138814.1 hypothetical protein -
  I5046_RS09015 (I5046_09015) - 1881278..1881463 (-) 186 WP_001286805.1 hypothetical protein -
  I5046_RS09020 (I5046_09020) - 1881465..1881575 (-) 111 WP_123138791.1 hypothetical protein -
  I5046_RS09025 (I5046_09025) - 1881691..1881798 (-) 108 Protein_1747 hypothetical protein -
  I5046_RS09030 (I5046_09030) - 1881956..1882678 (-) 723 WP_123138793.1 trypsin-like serine peptidase -
  I5046_RS09035 (I5046_09035) - 1882890..1883252 (-) 363 Protein_1749 SH3 domain-containing protein -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=446384 I5046_RS08990 WP_001124422.1 1877755..1878573(-) (recX) [Staphylococcus aureus strain JW31330_O1_dhc]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=446384 I5046_RS08990 WP_001124422.1 1877755..1878573(-) (recX) [Staphylococcus aureus strain JW31330_O1_dhc]
ATGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996