Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I5046_RS00120 Genome accession   NZ_CP065355
Coordinates   29434..30234 (+) Length   266 a.a.
NCBI ID   WP_123138698.1    Uniprot ID   -
Organism   Staphylococcus aureus strain JW31330_O1_dhc     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24434..35234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5046_RS00105 (I5046_00105) walK 25104..26930 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  I5046_RS00110 (I5046_00110) yycH 26923..28257 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  I5046_RS00115 (I5046_00115) - 28258..29046 (+) 789 WP_001104161.1 two-component system regulatory protein YycI -
  I5046_RS00120 (I5046_00120) vicX 29434..30234 (+) 801 WP_123138698.1 MBL fold metallo-hydrolase Regulator
  I5046_RS00125 (I5046_00125) adsA 30479..32797 (+) 2319 WP_000645774.1 LPXTG-anchored adenosine synthase AdsA -
  I5046_RS00130 (I5046_00130) rlmH 33165..33644 (+) 480 WP_000704778.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I5046_RS00135 (I5046_00135) - 33697..34983 (+) 1287 WP_000513494.1 SIR2 family protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30359.61 Da        Isoelectric Point: 6.3381

>NTDB_id=446313 I5046_RS00120 WP_123138698.1 29434..30234(+) (vicX) [Staphylococcus aureus strain JW31330_O1_dhc]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVCQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=446313 I5046_RS00120 WP_123138698.1 29434..30234(+) (vicX) [Staphylococcus aureus strain JW31330_O1_dhc]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAATGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTGACAGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTTGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474