Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   I5043_RS08980 Genome accession   NZ_CP065353
Coordinates   1877553..1878371 (-) Length   272 a.a.
NCBI ID   WP_001124424.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AR39_O1_merpol     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1872553..1883371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5043_RS08960 (I5043_08960) - 1873646..1874623 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  I5043_RS08965 (I5043_08965) - 1874884..1875720 (-) 837 WP_196931729.1 hypothetical protein -
  I5043_RS08970 (I5043_08970) - 1875729..1877246 (-) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  I5043_RS08975 (I5043_08975) - 1877261..1877575 (-) 315 WP_000435806.1 YfhH family protein -
  I5043_RS08980 (I5043_08980) recX 1877553..1878371 (-) 819 WP_001124424.1 recombination regulator RecX Regulator
  I5043_RS08985 (I5043_08985) sgtB 1878632..1879441 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  I5043_RS08990 (I5043_08990) - 1879708..1881275 (+) 1568 WP_196931730.1 IS3-like element ISSau2 family transposase -
  I5043_RS08995 (I5043_08995) - 1881444..1881959 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  I5043_RS09000 (I5043_09000) - 1882089..1882250 (-) 162 WP_001005407.1 SE1561 family protein -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32308.17 Da        Isoelectric Point: 5.9211

>NTDB_id=446205 I5043_RS08980 WP_001124424.1 1877553..1878371(-) (recX) [Staphylococcus aureus strain AR39_O1_merpol]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLYEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=446205 I5043_RS08980 WP_001124424.1 1877553..1878371(-) (recX) [Staphylococcus aureus strain AR39_O1_merpol]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGATGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGATATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGTATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACACAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993