Detailed information NTG0446143

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: HPK20_RS13655
• Genome accession: NZ_CP053664
• Coordinates: 2934046..2935053 (-)
• Length: 335 a.a.
• NCBI ID: WP_020429332.1
• Uniprot ID: A0AAX2LJL2
• Organism: Vibrio fluvialis strain A8
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2929046..2940053

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPK20_RS13630 (HPK20_13650)	rraA	2929687..2930214 (-)	528	WP_020329402.1	ribonuclease E activity regulator RraA	-
HPK20_RS13635 (HPK20_13655)	-	2930290..2931207 (-)	918	WP_020329401.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
HPK20_RS13640 (HPK20_13660)	hslU	2931296..2932627 (-)	1332	WP_171933984.1	HslU--HslV peptidase ATPase subunit	-
HPK20_RS13645 (HPK20_13665)	hslV	2932669..2933223 (-)	555	WP_020329399.1	ATP-dependent protease subunit HslV	-
HPK20_RS13650 (HPK20_13670)	ftsN	2933359..2933916 (-)	558	WP_024373673.1	cell division protein FtsN	-
HPK20_RS13655 (HPK20_13675)	cytR	2934046..2935053 (-)	1008	WP_020429332.1	DNA-binding transcriptional regulator CytR	Regulator
HPK20_RS13660 (HPK20_13680)	priA	2935358..2937559 (-)	2202	WP_143682671.1	primosomal protein N'	-
HPK20_RS13665 (HPK20_13685)	rpmE	2937805..2938023 (+)	219	WP_020329395.1	50S ribosomal protein L31	-
HPK20_RS13670 (HPK20_13690)	-	2938235..2939512 (+)	1278	WP_024373675.1	malic enzyme-like NAD(P)-binding protein	-
HPK20_RS13675 (HPK20_13695)	metJ	2939589..2939906 (-)	318	WP_020329393.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36914.45 Da
• Isoelectric Point: 6.3516

>NTDB_id=446143 HPK20_RS13655 WP_020429332.1 2934046..2935053(-) (cytR) [Vibrio fluvialis strain A8]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYYTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRVAQIAGPEAAVLCQFRQQGYQQALRRAGITRNPTYSMSGDFTFESGAKAVRQLLALPEPPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TQLVVRESAAPPRSM

Nucleotide

• Length: 1008 bp

>NTDB_id=446143 HPK20_RS13655 WP_020429332.1 2934046..2935053(-) (cytR) [Vibrio fluvialis strain A8]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGCGTTTCGACGGCGACGGTCTCGCGCGCTCTGATGAATCCCGAAAA
AGTTTCAGCCTCAACCCGTAAGCGGGTCGAGGAGGCAGTTTTAGAAGCTGGCTATTCACCGAATTCTTTGGCCCGAAATC
TGCGCCGCAATGAGTCAAAAACCATTGTCGCGATAGTGCCGGATATCTGTGACCCTTATTACACAGAGATCATTCGTGGT
ATCGAAGATGCTGCAATGGAACACGGTTATCTGGTGCTGCTGGGCGACAGCGGACAGCAGAAAAAACGTGAAAGCTCATT
TGTGAACCTGGTGTTTACCAAACAAGCGGACGGCATGTTACTGCTGGGGACTGACTTGCCGTTTGATGTGAGCAAACCCG
AGCAGAAAAACCTGCCACCGATGGTGATGGCATGTGAGTTTGCGCCGGAGCTTGAGCTACCTACGGTACACATTGATAAC
CTGACATCGGCGTTTGAAGCCGTGAACTATCTGACTCAGATGGGGCACAAGCGCGTGGCGCAAATCGCCGGACCGGAAGC
CGCGGTGCTGTGTCAGTTCCGTCAGCAAGGTTATCAGCAGGCGCTGCGTCGTGCGGGTATCACTCGCAATCCGACCTACA
GTATGAGTGGTGACTTTACTTTTGAGTCCGGAGCCAAAGCGGTGCGTCAATTATTGGCCCTGCCTGAGCCACCAACGGCT
ATCTTCTGTCACAACGATACCATGGCGATTGGCGCGATTCAGGAAGCGAAACGTCTGGGACTGCGCGTACCGCAGGATCT
CTCTGTGGTGGGCTTTGATGACATTCAATTCGCCCAGTACTGCGATCCACCGCTGACGACCATCTCTCAGCCTCGCTACG
AGATTGGCCGTCAGGCGATGCTGATGATGCTGGAATTGCTGCGTGGTCATGACGTGCGTGCCGGCTCACGTTTGCTGGAA
ACTCAGCTGGTGGTGCGTGAGAGTGCAGCGCCGCCTCGTTCGATGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	94.277	99.104	0.934
cytR	Vibrio parahaemolyticus RIMD 2210633	90.691	99.403	0.901