Detailed information NTG0044610

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BANAU_RS07540
• Genome accession: NC_017061
• Coordinates: 1501373..1502509 (-)
• Length: 378 a.a.
• NCBI ID: WP_014417673.1
• Uniprot ID: -
• Organism: Bacillus velezensis YAU B9601-Y2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1496373..1507509

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BANAU_RS07505 (BANAU_1409)	-	1496909..1497127 (+)	219	WP_014417667.1	helix-turn-helix domain-containing protein	-
BANAU_RS07510 (BANAU_1410)	-	1497175..1497456 (+)	282	WP_014417668.1	hypothetical protein	-
BANAU_RS07515	-	1497509..1497754 (-)	246	WP_041481754.1	helix-turn-helix domain-containing protein	-
BANAU_RS07520 (BANAU_1411)	-	1498255..1498971 (+)	717	WP_014721121.1	hypothetical protein	-
BANAU_RS07525 (BANAU_1412)	-	1499007..1499315 (-)	309	WP_014417670.1	hypothetical protein	-
BANAU_RS07530 (BANAU_1413)	-	1499328..1500752 (-)	1425	WP_014417671.1	lipase	-
BANAU_RS07535 (BANAU_1414)	-	1500802..1501167 (+)	366	WP_014417672.1	DUF1433 domain-containing protein	-
BANAU_RS21970	-	1501210..1501383 (-)	174	WP_169061491.1	hypothetical protein	-
BANAU_RS07540 (BANAU_1415)	rapC	1501373..1502509 (-)	1137	WP_014417673.1	RapH N-terminal domain-containing protein	Regulator
BANAU_RS07545 (BANAU_1416)	-	1502690..1503520 (-)	831	WP_014417674.1	SHOCT domain-containing protein	-
BANAU_RS07550 (BANAU_1417)	-	1503685..1504575 (-)	891	WP_014417675.1	SH3 domain-containing protein	-
BANAU_RS07555 (BANAU_1418)	-	1504663..1507281 (-)	2619	WP_014417676.1	phage tail protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44714.10 Da
• Isoelectric Point: 4.8741

>NTDB_id=44610 BANAU_RS07540 WP_014417673.1 1501373..1502509(-) (rapC) [Bacillus velezensis YAU B9601-Y2]
MKQLISSSKVGVKINEWYKYIRMFSVPDAEVLKSEVEQEINAMEENQDLLLYYSLMCFRHQLMLDYLEPKTMNEERPEIS
DLLEKIESSQAKLKGILEYYFNFFRGMYEFEEYEYLKAISFYKQAEKKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMH
HIVQAIESYRAHETYSVREIQCSFVIGLNYLDMEYPEKAIPHFQKAYKKALEIDMPRLAGSALYNLGISSFSEEKFDEAI
EYFKEGVLVYEQNGYEHANRLLDILFMLAKTNFKVNKKTEGTAVYNHGLSLAKNLNDEVLTKMFDFLNALYIDDNKEMLN
EILTYLEFKTMFSDVEDLATDAAKYYTKNEDHKAAGLFYEKVLYAQKQIQRGDCLYEI

Nucleotide

• Length: 1137 bp

>NTDB_id=44610 BANAU_RS07540 WP_014417673.1 1501373..1502509(-) (rapC) [Bacillus velezensis YAU B9601-Y2]
TTGAAACAGTTAATCTCCTCATCCAAAGTCGGCGTGAAGATTAATGAGTGGTACAAGTATATTCGCATGTTTAGTGTTCC
TGATGCAGAGGTGCTGAAATCAGAAGTGGAACAAGAAATAAACGCTATGGAAGAAAATCAGGATTTATTGTTGTACTATT
CCCTCATGTGTTTTAGACATCAATTAATGCTTGATTATCTTGAACCAAAAACCATGAATGAAGAACGACCTGAGATTTCA
GACTTATTAGAAAAGATCGAAAGTAGCCAAGCTAAATTGAAAGGAATTCTTGAATATTACTTTAACTTTTTCCGTGGGAT
GTATGAATTTGAAGAATACGAATATCTTAAAGCGATAAGTTTTTACAAACAAGCGGAAAAGAAGTTGTCACTTGTAGCCG
ACGAAATTGAGCGAGCGGAGTTTCATTACAAAGTCGCTGAAATTTATTATCACATGAAACAAACACACATGTCGATGCAC
CATATTGTTCAAGCAATCGAAAGCTACAGAGCGCATGAAACCTATTCTGTTAGAGAAATTCAATGTTCTTTTGTTATTGG
TCTAAATTATTTAGATATGGAGTACCCAGAAAAGGCTATCCCTCATTTTCAAAAAGCTTATAAAAAAGCACTTGAAATTG
ATATGCCAAGATTAGCCGGATCCGCTCTATATAATTTAGGGATTTCCTCTTTTTCTGAAGAAAAGTTCGACGAGGCTATT
GAGTATTTCAAAGAAGGAGTGTTGGTCTATGAGCAAAACGGATATGAACATGCTAACCGCTTATTAGACATTCTTTTCAT
GTTAGCGAAAACGAACTTTAAAGTAAATAAGAAAACTGAAGGAACAGCTGTTTATAATCATGGACTGTCATTGGCTAAAA
ACTTAAATGATGAAGTATTAACCAAAATGTTTGATTTCCTAAATGCCCTTTACATTGACGATAACAAAGAAATGCTAAAT
GAGATTCTTACTTATTTAGAATTTAAAACAATGTTTTCCGACGTGGAGGACTTAGCAACCGACGCAGCGAAGTATTATAC
AAAAAATGAAGACCATAAAGCGGCTGGATTATTTTATGAGAAAGTGCTTTATGCCCAAAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAATTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_8) (222-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	48.148	100	0.481
rapF	Bacillus subtilis subsp. subtilis str. 168	45.407	100	0.458