Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | HPE59_RS05215 | Genome accession | NZ_CP053659 |
| Coordinates | 1011739..1012041 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain 2016-IZSVE-19-111250 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1006739..1017041
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPE59_RS05190 (HPE59_05195) | rpsR | 1007102..1007362 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| HPE59_RS05195 (HPE59_05200) | lon | 1007422..1009797 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| HPE59_RS05200 (HPE59_05205) | - | 1009814..1010461 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| HPE59_RS05205 (HPE59_05210) | fliW | 1010622..1011011 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| HPE59_RS05210 (HPE59_05215) | proC | 1011011..1011742 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| HPE59_RS05215 (HPE59_05220) | ctsT | 1011739..1012041 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| HPE59_RS05220 (HPE59_05225) | - | 1012038..1012700 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| HPE59_RS05225 (HPE59_05230) | - | 1012697..1013149 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| HPE59_RS05230 (HPE59_05235) | hemD | 1013146..1013775 (-) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| HPE59_RS05235 (HPE59_05240) | thiE | 1013753..1014385 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| HPE59_RS05240 (HPE59_05245) | thiD | 1014375..1015187 (-) | 813 | WP_002890078.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| HPE59_RS05245 (HPE59_05250) | - | 1015184..1015870 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| HPE59_RS05250 (HPE59_05255) | - | 1015867..1016628 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=446046 HPE59_RS05215 WP_002853046.1 1011739..1012041(+) (ctsT) [Campylobacter jejuni strain 2016-IZSVE-19-111250]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=446046 HPE59_RS05215 WP_002853046.1 1011739..1012041(+) (ctsT) [Campylobacter jejuni strain 2016-IZSVE-19-111250]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |