Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   XAV_RS06590 Genome accession   NZ_CP053649
Coordinates   1524055..1524456 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas axonopodis pv. vasculorum strain NCPPB 796     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1519055..1529456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  XAV_RS06570 (XAV_06585) tsaB 1520072..1520797 (+) 726 WP_042824208.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  XAV_RS06575 (XAV_06590) - 1520833..1521708 (+) 876 Protein_1300 ADP-ribosylglycohydrolase family protein -
  XAV_RS06580 (XAV_06595) - 1521997..1522872 (-) 876 WP_042824206.1 energy transducer TonB -
  XAV_RS06585 (XAV_06600) gshB 1522869..1523819 (-) 951 WP_042824205.1 glutathione synthase -
  XAV_RS06590 (XAV_06605) pilG 1524055..1524456 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  XAV_RS06595 (XAV_06610) - 1524474..1524836 (+) 363 WP_042824204.1 PleD family two-component system response regulator -
  XAV_RS06600 (XAV_06615) - 1524836..1525366 (+) 531 WP_003482487.1 chemotaxis protein CheW -
  XAV_RS06605 (XAV_06620) - 1525406..1527442 (+) 2037 WP_134983899.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=445972 XAV_RS06590 WP_005913706.1 1524055..1524456(+) (pilG) [Xanthomonas axonopodis pv. vasculorum strain NCPPB 796]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=445972 XAV_RS06590 WP_005913706.1 1524055..1524456(+) (pilG) [Xanthomonas axonopodis pv. vasculorum strain NCPPB 796]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGGCTGAAGGTGATGGTCATTGATGATTCGAAAACCATTCGCCG
CACCGCCGAGACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACGGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAACAACCTCAGATCATTTTTGTCGACATCATGATGCCTCGCCTGGACGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTTACCCGTGAAGAACTACTGAGCGCTATCCGCACTTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684