Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I3K80_RS00315 Genome accession   NZ_CP065194
Coordinates   64515..65360 (+) Length   281 a.a.
NCBI ID   WP_001825659.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GDC6P096P     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 59515..70360
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I3K80_RS00300 (I3K80_00300) - 59781..61622 (-) 1842 WP_000077324.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  I3K80_RS00305 (I3K80_00305) metC 61591..62751 (-) 1161 WP_000175863.1 cystathionine beta-lyase MetC -
  I3K80_RS00310 (I3K80_00310) - 62748..63851 (-) 1104 WP_000655690.1 PLP-dependent transferase -
  I3K80_RS00315 (I3K80_00315) spo0J 64515..65360 (+) 846 WP_001825659.1 ParB/RepB/Spo0J family partition protein Regulator
  I3K80_RS00320 (I3K80_00320) - 65514..66395 (+) 882 WP_000373073.1 mechanosensitive ion channel family protein -
  I3K80_RS00325 (I3K80_00325) - 66425..66628 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  I3K80_RS00330 (I3K80_00330) ychF 66640..67737 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  I3K80_RS00335 (I3K80_00335) - 67823..68014 (-) 192 WP_001052481.1 hypothetical protein -
  I3K80_RS00340 (I3K80_00340) rpsF 68258..68554 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  I3K80_RS00345 (I3K80_00345) ssbA 68575..69078 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  I3K80_RS00350 (I3K80_00350) rpsR 69130..69372 (+) 243 WP_000897044.1 30S ribosomal protein S18 -
  I3K80_RS14445 - 69609..69836 (-) 228 Protein_71 Abi family protein -
  I3K80_RS14225 - 69829..70105 (-) 277 Protein_72 site-specific integrase -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32797.86 Da        Isoelectric Point: 10.0554

>NTDB_id=445878 I3K80_RS00315 WP_001825659.1 64515..65360(+) (spo0J) [Staphylococcus aureus strain GDC6P096P]
MSELSKSEDQRITKTKDEQIKKIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=445878 I3K80_RS00315 WP_001825659.1 64515..65360(+) (spo0J) [Staphylococcus aureus strain GDC6P096P]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGAAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTAAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAGGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381