Detailed information NTG0044587

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BANAU_RS01955
• Genome accession: NC_017061
• Coordinates: 384655..385803 (+)
• Length: 382 a.a.
• NCBI ID: WP_014304340.1
• Uniprot ID: I2C1C2
• Organism: Bacillus velezensis YAU B9601-Y2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 379655..390803

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BANAU_RS01935 (BANAU_0334)	-	380055..380738 (-)	684	WP_014416899.1	ABC transporter ATP-binding protein	-
BANAU_RS01940 (BANAU_0335)	-	380753..382186 (-)	1434	WP_014416900.1	ABC transporter permease	-
BANAU_RS01945 (BANAU_0336)	-	382399..383082 (+)	684	WP_014416901.1	response regulator transcription factor	-
BANAU_RS01950 (BANAU_0337)	-	383069..384496 (+)	1428	WP_088056326.1	sensor histidine kinase	-
BANAU_RS01955 (BANAU_0338)	rapC	384655..385803 (+)	1149	WP_014304340.1	Rap family tetratricopeptide repeat protein	Regulator
BANAU_RS01960 (BANAU_0339)	phrC	385787..385906 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
BANAU_RS20905	-	386057..386167 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
BANAU_RS01970 (BANAU_0340)	-	386247..387611 (-)	1365	WP_014416903.1	aspartate kinase	-
BANAU_RS01975 (BANAU_0341)	ceuB	388025..388978 (+)	954	WP_014416904.1	ABC transporter permease	Machinery gene
BANAU_RS01980 (BANAU_0342)	-	388968..389915 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
BANAU_RS01985 (BANAU_0343)	-	389909..390667 (+)	759	WP_012116804.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45494.75 Da
• Isoelectric Point: 4.9939

>NTDB_id=44587 BANAU_RS01955 WP_014304340.1 384655..385803(+) (rapC) [Bacillus velezensis YAU B9601-Y2]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=44587 BANAU_RS01955 WP_014304340.1 384655..385803(+) (rapC) [Bacillus velezensis YAU B9601-Y2]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAAGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATATACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

3D structure

• AlphaFold DB: I2C1C2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568