Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | I3J23_RS17945 | Genome accession | NZ_CP065159 |
| Coordinates | 3520711..3521073 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens strain GXU-1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3515711..3526073
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3J23_RS17915 (I3J23_17915) | flgD | 3516614..3517054 (+) | 441 | WP_003154247.1 | flagellar hook assembly protein FlgD | - |
| I3J23_RS17920 (I3J23_17920) | flgG | 3517079..3517855 (+) | 777 | WP_003154244.1 | flagellar basal body rod protein FlgG | - |
| I3J23_RS17925 (I3J23_17925) | - | 3517895..3518110 (+) | 216 | WP_043867090.1 | flagellar FlbD family protein | - |
| I3J23_RS17930 (I3J23_17930) | fliL | 3518107..3518526 (+) | 420 | WP_003154241.1 | flagellar basal body-associated protein FliL | - |
| I3J23_RS17935 (I3J23_17935) | fliM | 3518560..3519558 (+) | 999 | WP_003154240.1 | flagellar motor switch protein FliM | - |
| I3J23_RS17940 (I3J23_17940) | fliY | 3519548..3520684 (+) | 1137 | WP_003154239.1 | flagellar motor switch phosphatase FliY | - |
| I3J23_RS17945 (I3J23_17945) | pilH | 3520711..3521073 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| I3J23_RS17950 (I3J23_17950) | fliZ | 3521088..3521741 (+) | 654 | WP_003154237.1 | flagella biosynthesis regulatory protein FliZ | - |
| I3J23_RS17955 (I3J23_17955) | fliP | 3521734..3522399 (+) | 666 | WP_003154235.1 | flagellar type III secretion system pore protein FliP | - |
| I3J23_RS17960 (I3J23_17960) | fliQ | 3522414..3522683 (+) | 270 | WP_003154234.1 | flagellar biosynthesis protein FliQ | - |
| I3J23_RS17965 (I3J23_17965) | fliR | 3522690..3523469 (+) | 780 | WP_003154233.1 | flagellar biosynthetic protein FliR | - |
| I3J23_RS17970 (I3J23_17970) | flhB | 3523469..3524548 (+) | 1080 | WP_003154232.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=445865 I3J23_RS17945 WP_003154238.1 3520711..3521073(+) (pilH) [Bacillus amyloliquefaciens strain GXU-1]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=445865 I3J23_RS17945 WP_003154238.1 3520711..3521073(+) (pilH) [Bacillus amyloliquefaciens strain GXU-1]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTAGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTCTAAAGGAAATTAAACAGATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAGGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTAGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTCTAAAGGAAATTAAACAGATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAGGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |