Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   I3J23_RS10390 Genome accession   NZ_CP065159
Coordinates   2009801..2010883 (+) Length   360 a.a.
NCBI ID   WP_003156401.1    Uniprot ID   A0AAI8HS26
Organism   Bacillus amyloliquefaciens strain GXU-1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2004801..2015883
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I3J23_RS10375 (I3J23_10375) - 2004804..2005895 (+) 1092 WP_003156398.1 protein arginine kinase -
  I3J23_RS10380 (I3J23_10380) clpC 2005892..2008324 (+) 2433 WP_007410388.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  I3J23_RS10385 (I3J23_10385) radA/sms 2008418..2009797 (+) 1380 WP_014304212.1 DNA repair protein RadA Machinery gene
  I3J23_RS10390 (I3J23_10390) disA 2009801..2010883 (+) 1083 WP_003156401.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  I3J23_RS10395 (I3J23_10395) - 2010997..2012097 (+) 1101 WP_003156403.1 PIN/TRAM domain-containing protein -
  I3J23_RS10400 (I3J23_10400) ispD 2012110..2012808 (+) 699 WP_003156405.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  I3J23_RS10405 (I3J23_10405) ispF 2012801..2013277 (+) 477 WP_003156407.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  I3J23_RS10410 (I3J23_10410) gltX 2013369..2014820 (+) 1452 WP_003156409.1 glutamate--tRNA ligase -
  I3J23_RS10415 (I3J23_10415) cysE 2015131..2015784 (+) 654 WP_003156410.1 serine O-acetyltransferase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40671.21 Da        Isoelectric Point: 5.5321

>NTDB_id=445806 I3J23_RS10390 WP_003156401.1 2009801..2010883(+) (disA) [Bacillus amyloliquefaciens strain GXU-1]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIRLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATVEELDDVEGIGEVRAQKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=445806 I3J23_RS10390 WP_003156401.1 2009801..2010883(+) (disA) [Bacillus amyloliquefaciens strain GXU-1]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATTCTGCAGTTCGTTGCACCGGGCACCCCGCT
CAGAGCCGGGATAGAGAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGGTACAATGATAAGGTAAAGCAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGTGCCATT
ATTTTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAGGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACGGCGGAACGGGTGGCGAAGCAGACCGGCTGTCTCGTCATCGCCATTTCTGAGCGCAGAAATG
TCATTACGTTATATCAGGACAGCATGAAGTACACACTAAAGGACATAGGTTTTATTTTAACAAAGGCAAATCAGGCCATT
CAAACGCTCGAGAAGTATAAAACCATTTTAGACAAAACAATTACGGCTCTAAACGCATTAGAGTTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCTGTCATGCATCGGTATGAAATGGTGCTCCGAATAAAAAATGAAATCAATATGTATATTAAAG
AACTCGGAACGGAAGGCCACTTAATCCGTCTGCAGGTGATTGAACTGATTACGGACATGGAAGAAGAGGCGGCACTTTTC
ATCAAAGACTATGTCAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTCCAGGATATGTCCAGCTATGATCT
GCTGGATGATTCCATTCTGTTTAAACTGCTTGGATACCCGGCTTCTACGAATCTTGATGATTATGTGCTCCCGAGAGGCT
ACAGGCTGCTGAACAAAATTCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCGTTCGGATTTTTGCCAAGC
ATAACGGAAGCCACTGTAGAAGAGCTTGATGATGTCGAGGGTATCGGCGAAGTGCGCGCCCAAAAAATCAAAAAAGGCTT
AAAACGCCTTCAGGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AAI8HS26

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.444

100

0.944