Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   MGAS1882_RS09520 Genome accession   NC_017053
Coordinates   48092..48187 (+) Length   31 a.a.
NCBI ID   WP_198462994.1    Uniprot ID   -
Organism   Streptococcus pyogenes MGAS1882     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 43092..53187
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGAS1882_RS00245 (MGAS1882_0052) purK 43161..44234 (+) 1074 WP_014407196.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  MGAS1882_RS00250 (MGAS1882_0053) - 44236..45654 (+) 1419 WP_011888524.1 hypothetical protein -
  MGAS1882_RS00255 (MGAS1882_0054) purB 45674..46966 (+) 1293 WP_014407197.1 adenylosuccinate lyase -
  MGAS1882_RS00260 (MGAS1882_0055) comR 47097..48008 (+) 912 WP_002986681.1 transcriptional regulator Rgg4/ComR Regulator
  MGAS1882_RS09520 comS 48092..48187 (+) 96 WP_198462994.1 quorum-sensing system DWW-type pheromone Regulator
  MGAS1882_RS00265 (MGAS1882_0056) ruvB 48234..49232 (+) 999 WP_014407198.1 Holliday junction branch migration DNA helicase RuvB -
  MGAS1882_RS00270 (MGAS1882_0057) - 49370..49807 (+) 438 WP_002994668.1 low molecular weight protein-tyrosine-phosphatase -
  MGAS1882_RS00275 (MGAS1882_0058) - 49830..50231 (+) 402 WP_012560369.1 MORN repeat-containing protein -
  MGAS1882_RS00280 (MGAS1882_0059) - 50228..52003 (+) 1776 WP_014407199.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3857.66 Da        Isoelectric Point: 10.0436

>NTDB_id=44554 MGAS1882_RS09520 WP_198462994.1 48092..48187(+) (comS) [Streptococcus pyogenes MGAS1882]
MLKKYKYYFIFAALLSFKVVQELSAVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=44554 MGAS1882_RS09520 WP_198462994.1 48092..48187(+) (comS) [Streptococcus pyogenes MGAS1882]
ATGTTAAAAAAGTATAAGTACTATTTTATATTCGCAGCTCTACTATCTTTTAAAGTAGTTCAAGAGCTTAGTGCTGTTGA
CTGGTGGCGATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

100

100

1
  comS Streptococcus pyogenes MGAS315

45.161

100

0.452

Multiple sequence alignment