Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ICC24_RS21750 Genome accession   NZ_CP065029
Coordinates   4226553..4227347 (-) Length   264 a.a.
NCBI ID   WP_003177960.1    Uniprot ID   A0ABY3FW26
Organism   Bacillus licheniformis strain LCDD6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4221553..4232347
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ICC24_RS21720 (ICC24_21715) - 4221571..4221729 (-) 159 WP_003177948.1 CxxH/CxxC protein -
  ICC24_RS21725 (ICC24_21720) - 4221928..4222410 (-) 483 WP_009330015.1 DUF4234 domain-containing protein -
  ICC24_RS21730 (ICC24_21725) - 4222841..4223359 (-) 519 WP_011201784.1 GNAT family N-acetyltransferase -
  ICC24_RS21735 (ICC24_21730) - 4223390..4223860 (-) 471 WP_003177954.1 membrane protein -
  ICC24_RS21740 (ICC24_21735) - 4224117..4224962 (-) 846 WP_011198491.1 SAM hydrolase/SAM-dependent halogenase family protein -
  ICC24_RS21745 (ICC24_21740) htrA 4225259..4226470 (-) 1212 WP_003177958.1 S1C family serine protease Regulator
  ICC24_RS21750 (ICC24_21745) vicX 4226553..4227347 (-) 795 WP_003177960.1 MBL fold metallo-hydrolase Regulator
  ICC24_RS21755 (ICC24_21750) - 4227362..4228210 (-) 849 WP_003177962.1 two-component system regulatory protein YycI -
  ICC24_RS21760 (ICC24_21755) - 4228197..4229561 (-) 1365 WP_003177963.1 YycH family regulatory protein -
  ICC24_RS21765 (ICC24_21760) walK 4229551..4231395 (-) 1845 WP_003177965.1 cell wall metabolism sensor histidine kinase WalK -
  ICC24_RS21770 (ICC24_21765) walR 4231403..4232110 (-) 708 WP_003177967.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29219.18 Da        Isoelectric Point: 5.7678

>NTDB_id=445474 ICC24_RS21750 WP_003177960.1 4226553..4227347(-) (vicX) [Bacillus licheniformis strain LCDD6]
MSLQFSVLASGSTGNALYLETDDHAFLVDAGLSGKAMEGLMAQIDRKLDQLDGIFVTHEHSDHIKGLGVLARKYELPVYA
NEKTWKAMEGHIGKMDNGQKFVFPMETVKSFGSLDVESFGVSHDAAEPMFYVFHYNGRKLALITDTGYVSDRMKGIIRSA
NAFVFESNHDVGMLQMGRYPWNIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFAAGETFDLYDTDPKKPTPLVAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=445474 ICC24_RS21750 WP_003177960.1 4226553..4227347(-) (vicX) [Bacillus licheniformis strain LCDD6]
ATGAGCCTGCAATTTAGCGTACTTGCGAGCGGGAGTACCGGTAATGCTTTATATTTGGAAACCGATGACCACGCTTTTTT
AGTTGACGCAGGACTTAGCGGGAAGGCGATGGAAGGGCTGATGGCGCAAATTGATCGAAAGCTTGATCAGCTCGACGGCA
TCTTTGTTACACATGAGCACAGTGACCATATAAAAGGGCTTGGCGTGCTGGCAAGAAAATATGAGCTGCCCGTTTACGCC
AATGAAAAAACGTGGAAGGCGATGGAAGGGCATATCGGCAAAATGGATAACGGCCAAAAGTTCGTTTTTCCAATGGAAAC
CGTCAAGTCATTCGGCTCCCTTGATGTCGAATCGTTCGGGGTATCCCATGATGCCGCAGAGCCGATGTTTTACGTTTTTC
ATTACAATGGCCGAAAGCTCGCTTTGATTACGGATACGGGCTATGTCAGCGACAGAATGAAAGGCATCATCCGCTCGGCA
AACGCTTTTGTTTTTGAAAGCAATCATGATGTCGGCATGCTGCAAATGGGCCGCTATCCGTGGAACATCAAGCGCCGGAT
TCTAAGCGACGTCGGACACGTATCCAATGAGGACGCGGCACTCGCAATGACCGATGTAATCGGCGATGAGACATCGAGAA
TTTATTTGGCTCATTTAAGCCAGGACAACAACATGAAAGAGCTGGCAAGAATGTCTGTGCAGCAAACGCTGGCTGCCAAA
GGATTTGCGGCAGGAGAAACGTTTGACTTATATGATACCGATCCTAAGAAACCGACGCCTCTCGTAGCGGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.053

99.242

0.527