Detailed information NTG0445154

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: IIE09_RS21235
• Genome accession: NZ_CP064825
• Coordinates: 4400429..4401454 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli UTI89
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4395429..4406454

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IIE09_RS21205	zapB	4395513..4395758 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
IIE09_RS21210	rraA	4395843..4396328 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
IIE09_RS21215	menA	4396421..4397347 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
IIE09_RS21220	hslU	4397414..4398745 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
IIE09_RS21225	hslV	4398755..4399285 (-)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
IIE09_RS21230	ftsN	4399378..4400337 (-)	960	WP_000068834.1	cell division protein FtsN	-
IIE09_RS21235	cytR	4400429..4401454 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
IIE09_RS21240	priA	4401610..4403808 (-)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
IIE09_RS21245	rpmE	4404011..4404223 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
IIE09_RS21250	yiiX	4404284..4404892 (-)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
IIE09_RS21255	metJ	4404952..4405269 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=445154 IIE09_RS21235 WP_000644904.1 4400429..4401454(-) (cytR) [Escherichia coli UTI89]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=445154 IIE09_RS21235 WP_000644904.1 4400429..4401454(-) (cytR) [Escherichia coli UTI89]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628