Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HND92_RS16015 Genome accession   NZ_CP053553
Coordinates   3338896..3339288 (-) Length   130 a.a.
NCBI ID   WP_011806675.1    Uniprot ID   A0A6M6I9J5
Organism   Diaphorobacter sp. JS3050     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3333896..3344288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HND92_RS16000 (HND92_16025) - 3335689..3337953 (-) 2265 WP_172208406.1 methyl-accepting chemotaxis protein -
  HND92_RS16005 (HND92_16030) - 3337975..3338502 (-) 528 WP_011806673.1 chemotaxis protein CheW -
  HND92_RS16010 (HND92_16035) - 3338519..3338884 (-) 366 WP_011806674.1 PleD family two-component system response regulator -
  HND92_RS16015 (HND92_16040) pilG 3338896..3339288 (-) 393 WP_011806675.1 PleD family two-component system response regulator Regulator
  HND92_RS16020 (HND92_16045) - 3339340..3339492 (-) 153 WP_011806676.1 rubredoxin -
  HND92_RS16025 (HND92_16050) - 3339608..3340552 (+) 945 WP_011806677.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  HND92_RS16030 (HND92_16055) hemL 3340536..3341840 (+) 1305 WP_015914198.1 glutamate-1-semialdehyde 2,1-aminomutase -
  HND92_RS16035 (HND92_16060) - 3342023..3343783 (+) 1761 WP_172208410.1 alkaline phosphatase -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14430.55 Da        Isoelectric Point: 6.4477

>NTDB_id=445107 HND92_RS16015 WP_011806675.1 3338896..3339288(-) (pilG) [Diaphorobacter sp. JS3050]
MATTTTGPTFRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNAH
FADTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNAQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=445107 HND92_RS16015 WP_011806675.1 3338896..3339288(-) (pilG) [Diaphorobacter sp. JS3050]
TTGGCTACGACGACGACCGGTCCCACCTTCCGTGTCCTGGTGGTGGACGACAGCAATACCATACGGCGCAGCGCCGAAAT
TTTCCTCAAGCAGGGAGGGCACGAGGTTTTATTGGCCGACGATGGTTTCGATGCCTTGGCCAAAGTCAATGATTACCAGC
CTCAGCTGATTTTCTGCGACATCCTCATGCCCAAGCTGGATGGTTATCAGACCTGCGCCATCATCAAACGCAACGCGCAT
TTTGCTGATACGCCCGTGGTAATGCTTTCATCCAAGGACGGGGTTTTCGATAAGGCGCGCGGCCGCATGGTCGGTTGCCA
GGAATATCTGACCAAACCATTTACCAAAGACCAGTTGCTGCAGGCTGTGCAGCAATTTGGAAATGCCCAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6M6I9J5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

56.41

90

0.508