Detailed information NTG0445043

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: HOO69_RS01010
• Genome accession: NZ_CP053541
• Coordinates: 202879..206265 (-)
• Length: 1128 a.a.
• NCBI ID: WP_171801102.1
• Uniprot ID: -
• Organism: Vibrio europaeus strain NPI-1
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 197879..211265

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HOO69_RS00995 (HOO69_01000)	-	198357..199382 (-)	1026	WP_171382799.1	ABC transporter permease	-
HOO69_RS01000 (HOO69_01005)	-	199385..200371 (-)	987	WP_171382800.1	ABC transporter permease	-
HOO69_RS01005 (HOO69_01010)	-	200544..202226 (-)	1683	WP_069667555.1	ABC transporter substrate-binding protein	-
HOO69_RS01010 (HOO69_01015)	chiS	202879..206265 (-)	3387	WP_171801102.1	response regulator	Regulator
HOO69_RS01015 (HOO69_01020)	rsmC	206475..207497 (-)	1023	WP_171801103.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
HOO69_RS01020 (HOO69_01025)	-	207592..208677 (-)	1086	WP_069667552.1	AI-2E family transporter	-
HOO69_RS01025 (HOO69_01030)	hemL	208941..210233 (-)	1293	WP_171801104.1	glutamate-1-semialdehyde 2,1-aminomutase	-
HOO69_RS01030 (HOO69_01035)	erpA	210485..210826 (+)	342	WP_004742653.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127129.39 Da
• Isoelectric Point: 5.6571

>NTDB_id=445043 HOO69_RS01010 WP_171801102.1 202879..206265(-) (chiS) [Vibrio europaeus strain NPI-1]
MFKFYRKQKFKRLQSTLMLAFLVLSITPLTVIAIFFLQSHTQDLQEQSTSHLTSVRDSKRQQVIDYLYAKESEVMGFVRS
ELAYASGGRFYGLVNAFSSLGLDIEQAREYAQRRYIQGSGDQIKTSILPQSSVYNGTERYRLLHKRYHWAYLELLKRSDF
DDILLVDREGNVTYSIYKHDNFGTNLLTGKYKDDNLGKTFAKLRNLVNDKRKTNEDFTPLIISDFSSEQGKPVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLVADKSNLVSMKTLLVGSDHQSRTLAYQQEDIDKSRQVVDLALAGASDVGTYTNTENEA
IIAAYSPISFKGIDWAIVVEVPESVAFARVHQLETLFIFAMLTAILLVVMASHYLSNFITSPLLQLTWAAEKVSAGDLDA
DMNNTQRKDEIGRLAISFERMQRSIREKILLIKQQNEELESNLQLIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALASGANGPITSEHKYQLDIIINSGQRLATLVDDLLDYHKMRYGNLDIETSAIDLSGSTRLVLELSSHLIGSKPLRI
INQVPDEPVWVSADPQRLEQVLYNLVGNAIKYTSEGKIVISASVVDDNIRVQVVDTGQGIPADQLDHIFEPLIQAGSDAS
RYRQGAGLGLSISRQLIELMQGTLYVSSQPMVGTTFSFTLPIANTEQIEQANHYESAHFRAPNSGEIELEEPASLPENPD
GPLLLVVDDEPVNLRVLDSFLRLEGYRVRTAKDGHEALETIGKEKPELLLLDIMMPGMSGYQVCETLRETYDHAQLPVIM
LTALNQTDDRVRGFNAGANDYLSKPFNKQELAARIVAHLTASKAEQRRIENQQLHQELKHRAIVEASLLETQGRLLEQLE
TAPEAIVCVREDNKIRFANEAASRLFKRSTEQLKRSSADEIIAPKFLNVEQEHYCGTIDVYVEDVRQHLSADILKLPEGA
GLRSMYIFNVGGGINAARINNLETAIEALSSFAFEGDKAKLQELKELGGEFTRLADRATSDNKSKQEVMREVLVEAMTNA
LIYWESVTGQTKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRPETLPKTPRWRTVLSSLDYILEHCNEQSPERTHIEGLRD
KLQHLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=445043 HOO69_RS01010 WP_171801102.1 202879..206265(-) (chiS) [Vibrio europaeus strain NPI-1]
ATGTTTAAGTTTTATCGAAAACAGAAGTTTAAACGCCTTCAGAGTACCTTAATGCTGGCATTTTTAGTGTTGAGTATTAC
CCCTCTGACGGTTATTGCGATCTTTTTCTTACAGTCCCACACTCAAGATCTTCAAGAGCAAAGTACCTCACACCTAACCT
CGGTTCGAGATAGTAAGCGCCAACAAGTGATCGATTACTTATACGCCAAGGAGTCTGAGGTAATGGGCTTCGTCCGTTCG
GAATTAGCCTATGCCAGTGGTGGACGTTTCTATGGGTTGGTCAACGCCTTTAGCAGCTTAGGTTTGGATATTGAGCAAGC
TCGTGAGTACGCTCAGCGTCGTTATATCCAAGGTTCAGGCGACCAAATTAAAACCTCAATATTACCTCAGTCGAGTGTCT
ATAACGGCACAGAACGCTACCGCTTACTCCACAAACGTTATCACTGGGCATATCTAGAGCTTCTAAAGCGCTCTGATTTT
GATGACATTCTACTTGTCGATAGAGAAGGTAATGTCACTTACTCGATCTACAAGCATGATAACTTTGGTACTAACCTGCT
GACGGGTAAATACAAAGACGATAACTTAGGTAAAACCTTCGCTAAGCTGCGTAATCTGGTTAACGATAAACGCAAAACCA
ATGAAGATTTTACCCCTCTGATCATTTCCGACTTCTCTAGCGAGCAAGGAAAACCCGTAGCTTGGCTTGGTGCCCCTATA
ATCCAGCAAGGCTATTTGCACAGTTATGCGATGTTTAGGTTGCCAAACAATGGCATCACCAAACTGGTCGCCGACAAGAG
CAATCTGGTGTCTATGAAAACACTACTAGTCGGCTCCGATCATCAATCACGCACCCTTGCCTACCAACAAGAAGATATTG
ATAAAAGCCGTCAAGTGGTCGACCTTGCGCTTGCAGGCGCAAGCGACGTAGGCACTTATACCAACACGGAAAATGAAGCG
ATTATTGCCGCTTACAGCCCAATTTCCTTTAAAGGTATTGACTGGGCCATTGTAGTAGAAGTGCCAGAAAGTGTCGCCTT
CGCCCGTGTCCACCAGCTCGAAACCCTATTTATCTTCGCCATGCTTACTGCCATTCTATTGGTTGTCATGGCCTCGCATT
ATTTGTCGAACTTCATCACCTCACCACTGCTACAACTGACTTGGGCGGCAGAGAAAGTGTCGGCTGGCGATCTTGATGCC
GACATGAACAACACTCAGCGCAAAGACGAAATTGGGCGCTTGGCGATCAGCTTCGAGCGGATGCAACGCTCCATTAGAGA
GAAGATCCTGCTGATCAAACAGCAAAATGAAGAGCTAGAAAGTAATCTTCAACTGATCCAGAAACAAAATGAAGAACTGC
AATTGGCGAATAAACTCAAAGATGAGTTCTTGGCCACCACTTCCCATGAGCTACGCACTCCACTTCATGGTATGGTCGGT
ATTGCTGAAGCGCTCGCCTCTGGCGCTAATGGCCCCATCACCTCTGAGCATAAGTATCAGCTCGATATCATCATCAATAG
TGGTCAGCGTTTAGCTACCTTGGTTGATGACCTGCTCGACTATCATAAGATGCGCTATGGCAATCTAGATATCGAGACCA
GTGCCATCGATTTATCAGGCTCTACTCGCTTGGTGTTGGAACTCTCTTCTCACTTGATAGGCTCCAAGCCTCTGCGAATT
ATTAATCAGGTTCCTGACGAACCTGTTTGGGTTAGTGCCGATCCACAACGACTAGAGCAAGTTTTATATAACTTGGTCGG
CAATGCGATTAAATACACTAGCGAAGGAAAGATCGTTATCTCAGCCAGTGTGGTAGATGACAACATTCGCGTTCAAGTGG
TCGATACAGGGCAAGGTATCCCAGCCGATCAGCTTGACCACATCTTTGAACCTCTTATTCAAGCAGGAAGCGACGCGAGT
CGTTATCGTCAAGGAGCGGGATTGGGCTTGTCGATTAGCCGTCAGCTAATTGAACTAATGCAAGGTACGCTCTATGTCAG
CAGCCAGCCTATGGTTGGAACCACCTTTAGCTTCACGTTGCCAATCGCCAATACAGAGCAAATTGAGCAAGCAAACCATT
ATGAGTCCGCTCATTTTAGAGCGCCGAACTCCGGTGAGATTGAACTAGAGGAGCCAGCAAGCTTACCTGAAAATCCAGAT
GGCCCTCTATTACTTGTCGTCGACGACGAACCTGTAAACCTACGGGTATTGGATAGTTTCTTGCGCCTAGAAGGCTATCG
TGTTCGAACCGCGAAAGATGGCCATGAGGCGCTGGAAACCATCGGTAAGGAAAAACCTGAGCTGCTGCTACTGGATATAA
TGATGCCGGGAATGAGTGGTTACCAAGTGTGTGAAACTCTACGCGAGACCTACGATCATGCACAACTACCCGTGATCATG
CTAACTGCTTTAAACCAAACTGATGATCGGGTACGCGGCTTTAACGCGGGTGCCAACGACTACCTATCCAAGCCATTTAA
CAAGCAAGAGCTGGCCGCTCGAATCGTCGCTCATCTCACCGCTAGCAAAGCGGAACAGCGTCGAATCGAAAATCAACAAC
TGCATCAAGAACTAAAACATCGGGCAATCGTCGAAGCAAGTTTACTTGAGACACAAGGCCGACTACTTGAGCAACTTGAG
ACCGCTCCAGAGGCTATTGTCTGTGTACGGGAAGATAATAAGATTCGCTTCGCCAACGAAGCGGCATCAAGGCTGTTTAA
ACGCTCAACCGAACAGCTTAAACGTTCAAGCGCAGACGAAATCATTGCACCTAAGTTCCTCAATGTGGAACAGGAACACT
ACTGCGGCACTATTGATGTCTATGTAGAAGATGTAAGGCAGCACCTGTCGGCAGATATCCTCAAGCTGCCTGAAGGAGCT
GGACTGCGCTCTATGTACATCTTTAACGTCGGTGGTGGAATCAATGCGGCGCGTATTAACAACCTAGAGACCGCAATTGA
GGCATTATCTAGCTTCGCTTTCGAAGGGGATAAAGCCAAACTGCAAGAGCTTAAAGAACTAGGCGGAGAATTTACTCGCT
TGGCAGACAGAGCAACAAGCGACAACAAGTCAAAACAAGAGGTGATGCGCGAAGTATTGGTAGAAGCGATGACTAACGCG
CTTATTTATTGGGAATCGGTTACAGGCCAAACTAAGTTTGCTTTTGCTGAGCAAAGCGGTTTATGGCGCGTGTATCTCGA
CCGAAGCACATTGCAAACCCGCACCTTGGACAAGTACCTCCGACCGGAAACCCTACCGAAGACTCCGCGTTGGAGAACCG
TATTAAGCTCTCTCGATTACATTCTTGAGCACTGCAATGAACAAAGTCCAGAGAGAACCCACATAGAAGGGTTACGCGAT
AAATTGCAGCATCTACTCACTAGCTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• Response regulator receiver domain (Response_reg) (725-835)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	79.344	100	0.793