Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | ITP52_RS12825 | Genome accession | NZ_CP064818 |
| Coordinates | 2555537..2556670 (+) | Length | 377 a.a. |
| NCBI ID | WP_003227715.1 | Uniprot ID | P70962 |
| Organism | Bacillus subtilis strain SH1 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2550537..2561670
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ITP52_RS12795 (ITP52_12795) | ywmC | 2551346..2552029 (+) | 684 | WP_003227700.1 | VWA domain-containing protein | - |
| ITP52_RS12800 (ITP52_12800) | - | 2552160..2552300 (+) | 141 | WP_003227702.1 | hypothetical protein | - |
| ITP52_RS12805 (ITP52_12805) | ywmD | 2552353..2553027 (+) | 675 | WP_003243553.1 | VWA domain-containing protein | - |
| ITP52_RS12810 (ITP52_12810) | - | 2553122..2553283 (+) | 162 | WP_003227706.1 | hypothetical protein | - |
| ITP52_RS12815 (ITP52_12815) | fdhD | 2553516..2554304 (+) | 789 | WP_003227709.1 | formate dehydrogenase accessory sulfurtransferase FdhD | - |
| ITP52_RS12820 (ITP52_12820) | moaA | 2554320..2555345 (+) | 1026 | WP_043940213.1 | GTP 3',8-cyclase MoaA | - |
| ITP52_RS12825 (ITP52_12825) | rapC | 2555537..2556670 (+) | 1134 | WP_003227715.1 | response regulator aspartate phosphatase RapB | Regulator |
| ITP52_RS12830 (ITP52_12830) | - | 2556825..2557304 (+) | 480 | WP_003244390.1 | hypothetical protein | - |
| ITP52_RS12835 (ITP52_12835) | csbD | 2557377..2557565 (+) | 189 | WP_015251021.1 | stress response protein CsbD | - |
| ITP52_RS12840 (ITP52_12840) | - | 2557786..2558049 (+) | 264 | WP_231573524.1 | ABC transporter | - |
| ITP52_RS12845 (ITP52_12845) | - | 2558253..2558411 (+) | 159 | WP_120363539.1 | hypothetical protein | - |
| ITP52_RS12850 (ITP52_12850) | ureA | 2558606..2558923 (+) | 318 | WP_003227724.1 | urease subunit gamma | - |
| ITP52_RS12855 (ITP52_12855) | ureB | 2558920..2559294 (+) | 375 | WP_041850426.1 | urease subunit beta | - |
| ITP52_RS12860 (ITP52_12860) | ureC | 2559291..2561000 (+) | 1710 | WP_015714862.1 | urease subunit alpha | - |
| ITP52_RS12865 (ITP52_12865) | ywnA | 2561135..2561536 (+) | 402 | WP_003227734.1 | Rrf2 family transcriptional regulator | - |
Sequence
Protein
Download Length: 377 a.a. Molecular weight: 45037.17 Da Isoelectric Point: 4.8005
>NTDB_id=445020 ITP52_RS12825 WP_003227715.1 2555537..2556670(+) (rapC) [Bacillus subtilis strain SH1]
MAAYEIPSSQVGVKINKWYKHILAFQVADAVKLKEEIDLDIEQMEEDQLLLLYYQLISYRHQIMLDYVKPDLHEESQLQY
RELIKTLESNQDSISGLSEYYFHLFRGMYEFEQNNYISAISFYRKAEKMLAFVEDEIERAEFHFKVAEVFYIMKQTHFSM
NHAVQALETYKAHDFYRVRRIQCHFVISGNYIDYRNYEKALEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQA
AEYFEKALPVFEDYQLEQLPKALFSLTRVLFKKQDSEAAIRYYEKGIAIAQKRNDFFSLAKYKFLQALYVESVNLNMIQE
VFDYMEEKGLYVYIEEFALDAASYFSHREQYKEAVYFYEKAVSMREMIQRNDCLYEV
MAAYEIPSSQVGVKINKWYKHILAFQVADAVKLKEEIDLDIEQMEEDQLLLLYYQLISYRHQIMLDYVKPDLHEESQLQY
RELIKTLESNQDSISGLSEYYFHLFRGMYEFEQNNYISAISFYRKAEKMLAFVEDEIERAEFHFKVAEVFYIMKQTHFSM
NHAVQALETYKAHDFYRVRRIQCHFVISGNYIDYRNYEKALEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQA
AEYFEKALPVFEDYQLEQLPKALFSLTRVLFKKQDSEAAIRYYEKGIAIAQKRNDFFSLAKYKFLQALYVESVNLNMIQE
VFDYMEEKGLYVYIEEFALDAASYFSHREQYKEAVYFYEKAVSMREMIQRNDCLYEV
Nucleotide
Download Length: 1134 bp
>NTDB_id=445020 ITP52_RS12825 WP_003227715.1 2555537..2556670(+) (rapC) [Bacillus subtilis strain SH1]
ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAAGTGGTATAAGCACATTTTAGCATTTCAAGT
GGCTGATGCCGTAAAGCTGAAAGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTTCTCCTGTATT
ATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTATGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATAT
CGTGAATTGATCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTATTATTTTCACTTGTTTAGAGG
AATGTACGAATTTGAACAGAACAATTACATCTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG
AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTTTATATTATGAAGCAGACGCACTTTTCCATG
AACCATGCTGTACAGGCGCTGGAGACGTATAAGGCTCACGATTTTTACAGAGTCAGAAGAATTCAATGCCATTTCGTCAT
ATCAGGAAACTACATTGACTACAGAAATTATGAAAAAGCGCTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGG
AAGGACAGCCCCGTTTGATCGGATCAGCCCTTTATAATATTGGTAATTGCTATGATGACAAGGGGGAGCTGGATCAGGCC
GCCGAATACTTTGAAAAAGCGCTTCCTGTCTTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC
TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATACGGTACTATGAAAAAGGGATTGCCATTGCCCAAAAACGAA
ACGACTTCTTCAGTCTGGCAAAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGAATATGATTCAAGAA
GTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATATTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCA
TCGCGAACAATATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGATGATTCAAAGGAACGATTGTT
TATATGAAGTATGA
ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAAGTGGTATAAGCACATTTTAGCATTTCAAGT
GGCTGATGCCGTAAAGCTGAAAGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTTCTCCTGTATT
ATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTATGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATAT
CGTGAATTGATCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTATTATTTTCACTTGTTTAGAGG
AATGTACGAATTTGAACAGAACAATTACATCTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG
AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTTTATATTATGAAGCAGACGCACTTTTCCATG
AACCATGCTGTACAGGCGCTGGAGACGTATAAGGCTCACGATTTTTACAGAGTCAGAAGAATTCAATGCCATTTCGTCAT
ATCAGGAAACTACATTGACTACAGAAATTATGAAAAAGCGCTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGG
AAGGACAGCCCCGTTTGATCGGATCAGCCCTTTATAATATTGGTAATTGCTATGATGACAAGGGGGAGCTGGATCAGGCC
GCCGAATACTTTGAAAAAGCGCTTCCTGTCTTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC
TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATACGGTACTATGAAAAAGGGATTGCCATTGCCCAAAAACGAA
ACGACTTCTTCAGTCTGGCAAAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGAATATGATTCAAGAA
GTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATATTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCA
TCGCGAACAATATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGATGATTCAAAGGAACGATTGTT
TATATGAAGTATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
42.632 |
100 |
0.43 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
42.667 |
99.469 |
0.424 |