Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ITP52_RS10330 Genome accession   NZ_CP064818
Coordinates   2073063..2073890 (-) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain SH1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2068063..2078890
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ITP52_RS10305 (ITP52_10305) abrB 2070409..2070699 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  ITP52_RS10310 (ITP52_10310) rsmI 2070748..2071626 (-) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ITP52_RS10315 (ITP52_10315) yazA 2071601..2071900 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  ITP52_RS10320 (ITP52_10320) trmNF 2071887..2072630 (-) 744 WP_003226765.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ITP52_RS10325 (ITP52_10325) yabA 2072689..2073048 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  ITP52_RS10330 (ITP52_10330) yaaT 2073063..2073890 (-) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  ITP52_RS10335 (ITP52_10335) holB 2073893..2074882 (-) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  ITP52_RS10340 (ITP52_10340) yaaR 2074894..2075334 (-) 441 WP_009966249.1 YaaR family protein -
  ITP52_RS10345 (ITP52_10345) darA 2075347..2075676 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  ITP52_RS10350 (ITP52_10350) tmk 2075750..2076388 (-) 639 WP_003226776.1 dTMP kinase -
  ITP52_RS10355 (ITP52_10355) efpO 2076385..2077827 (-) 1443 WP_003226777.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=445004 ITP52_RS10330 WP_003226767.1 2073063..2073890(-) (yaaT) [Bacillus subtilis strain SH1]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=445004 ITP52_RS10330 WP_003226767.1 2073063..2073890(-) (yaaT) [Bacillus subtilis strain SH1]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996