Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   IXH55_RS07605 Genome accession   NZ_CP064772
Coordinates   1570442..1571242 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain TCH32767     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1565442..1576242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IXH55_RS07585 (IXH55_07535) - 1565509..1566711 (-) 1203 WP_001631029.1 restriction endonuclease subunit S -
  IXH55_RS07590 (IXH55_07540) - 1566704..1566847 (-) 144 WP_001631028.1 restriction endonuclease subunit R -
  IXH55_RS07595 (IXH55_07545) rlmH 1567050..1567529 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  IXH55_RS07600 (IXH55_07550) adsA 1567897..1570215 (-) 2319 WP_000645787.1 LPXTG-anchored adenosine synthase AdsA -
  IXH55_RS07605 (IXH55_07555) vicX 1570442..1571242 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  IXH55_RS07610 (IXH55_07560) yycI 1571631..1572419 (-) 789 WP_001104165.1 two-component system regulatory protein YycI -
  IXH55_RS07615 (IXH55_07565) yycH 1572420..1573754 (-) 1335 WP_001060140.1 two-component system activity regulator YycH -
  IXH55_RS07620 (IXH55_07570) walK 1573747..1575573 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=444886 IXH55_RS07605 WP_000088649.1 1570442..1571242(-) (vicX) [Staphylococcus aureus strain TCH32767]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=444886 IXH55_RS07605 WP_000088649.1 1570442..1571242(-) (vicX) [Staphylococcus aureus strain TCH32767]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGATGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474