Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   HLV59_RS03240 Genome accession   NZ_CP053391
Coordinates   662149..666633 (+) Length   1494 a.a.
NCBI ID   WP_171429332.1    Uniprot ID   -
Organism   Acinetobacter lactucae isolate QL-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 657149..671633
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HLV59_RS03215 - 657593..658231 (-) 639 WP_171429331.1 hypothetical protein -
  HLV59_RS03220 pilG 658515..658898 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  HLV59_RS03225 - 658922..659284 (+) 363 WP_002116220.1 PleD family two-component system response regulator -
  HLV59_RS03230 - 659345..659881 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  HLV59_RS03235 - 659924..662002 (+) 2079 WP_016143403.1 methyl-accepting chemotaxis protein -
  HLV59_RS03240 chpA 662149..666633 (+) 4485 WP_171429332.1 hybrid sensor histidine kinase/response regulator Regulator
  HLV59_RS03245 - 666633..667100 (+) 468 WP_171429333.1 hypothetical protein -
  HLV59_RS03250 - 667303..668694 (+) 1392 WP_171429334.1 coproporphyrinogen-III oxidase family protein -
  HLV59_RS03255 - 668703..669584 (+) 882 WP_016143399.1 alpha/beta fold hydrolase -
  HLV59_RS03260 dapE 669723..670859 (-) 1137 WP_016143398.1 succinyl-diaminopimelate desuccinylase -
  HLV59_RS03265 - 670985..671128 (-) 144 WP_171429335.1 entericidin A/B family lipoprotein -

Sequence


Protein


Download         Length: 1494 a.a.        Molecular weight: 170564.90 Da        Isoelectric Point: 4.4262

>NTDB_id=444687 HLV59_RS03240 WP_171429332.1 662149..666633(+) (chpA) [Acinetobacter lactucae isolate QL-1]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFVEEIEEIFVELQSLIDEWMQSENIATLTEIRRYFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINHSLGLTPNIQQYVQLVFKFYFFKLVDDFKSKKDHSLDFKSLILLGQQLQQQQSLEPALDELLLLS
DILTAETQTGLETYDLEPETAKVLTISTPEVAIENEQTLAETLILFMEEAEEYLATIDQFLEQEIHQHESYNALIRALHT
LRGSSAMAHVEPIFDASTKVEHLFKILLQEELSSHSEEISLLRYYREFIRNSLDLLAAHCSTEQLESDLQKFNQIWDAYM
EQHGEHSSPLIPPHGLVSQLLQLDVAELLDAELDFEKGIRTEFPHYLERLSEQADVLLQHTQSQAMVGLYEYTNQLKESY
DILLDRPDLLQSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLEELKLYTQHIPILNIEPTFNTEVEQTTNKPL
IENVFTDQVTIGQSVQLDRQFISSEHVNRHFDPDLLDIFLEEADELLEGMDTDLNIWVKDQENFAALNNLMRYLHTLKGG
ANMIQATYIGLIAHELESIYERLIQKQLIASSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKNAAQTYDSFSS
TVKDEQTQTEAYVIPELNFEALQQEVINNTALSFSELTSGSEPIAESNNQLVEYAELRVLYADHDHTESVQDQDINSVVE
QTFMEEAAELLEMADHLLRQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEQFALHHFSSNIYDNL
LESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSSEPVMSFVQGDGTEPPPMMGAWEHTERLDQ
NNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIENSRYTEFD
PLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQRIVRQTST
ALNRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAQKPETGRIELNIHRQGTDVVVTFKDDGQGI
DIEKVRQKALMSGLIHSEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHISVDSVYGQGTVFTIR
VPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSAQEVFEFENKRYPLRYLSEFVGNQPIPRLSGMMYSL
PVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTHRYKLLNETIY
RQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNLVRHHDLH
QDMPVIMITSRTGEKHRERAFALGVNQYMGKPFQEEDLLHNIDALFMTFEGGLA

Nucleotide


Download         Length: 4485 bp        

>NTDB_id=444687 HLV59_RS03240 WP_171429332.1 662149..666633(+) (chpA) [Acinetobacter lactucae isolate QL-1]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTACTCTCAACAAGATGATGAATTTCT
TGAAATCTTTGTCGAAGAAATTGAGGAAATTTTTGTTGAATTACAATCTTTGATTGACGAGTGGATGCAATCTGAAAATA
TTGCTACGCTTACTGAAATCCGCCGTTATTTTCATACATTGAAAGGTTCTGGCCGGATGATTGGTGCAAAATCATCTGCT
GAGCTTGCTTGGACTGTAGAAGATACGCTTAATCGGGTAATCAATCATAGTCTCGGATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAGTTAGTCGATGACTTCAAATCTAAAAAAGATCATAGCCTAGACTTTA
AATCCCTAATTTTATTGGGGCAACAATTACAACAACAGCAAAGTTTAGAACCCGCTTTAGACGAACTTTTATTATTATCA
GATATCCTTACTGCTGAAACTCAAACTGGTTTAGAAACATATGATTTAGAACCAGAAACAGCTAAAGTTTTAACTATATC
TACTCCAGAAGTCGCTATAGAAAATGAGCAGACCCTTGCTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAATACT
TAGCGACGATTGATCAATTTTTAGAACAAGAAATACATCAGCATGAAAGTTATAATGCTTTAATACGTGCGTTACATACG
TTACGCGGCAGCTCGGCCATGGCGCATGTTGAACCAATCTTTGATGCTAGTACCAAGGTTGAGCATTTATTTAAAATACT
ATTACAAGAAGAGCTTTCTTCTCACTCTGAAGAAATTTCATTACTCCGTTATTATCGTGAGTTTATTCGAAATAGTTTAG
ATCTATTGGCTGCACATTGCTCTACTGAGCAATTGGAATCTGATCTACAAAAATTTAATCAGATTTGGGATGCTTATATG
GAGCAGCATGGTGAGCATTCAAGCCCACTCATACCTCCACATGGATTAGTGTCTCAGTTATTACAATTAGATGTTGCTGA
ATTACTTGATGCGGAATTAGATTTTGAGAAGGGAATACGGACAGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTGTTGTTGCAACACACTCAGTCGCAAGCAATGGTTGGTTTATATGAATATACTAACCAGTTGAAAGAAAGCTAT
GACATATTGCTTGATCGACCTGATTTATTACAATCAGACTATGTTTTTGAAATTTATCAAAAAGCGCACCAACAATTAAT
TCAATTATTTGATGCCTTAGCTGCGGGACAAAGAGTAAGTATTATTGAGCAACACCAAAATGTCTTGGAAGAGCTAAAAC
TATATACTCAACATATTCCAATTCTTAATATTGAACCAACCTTTAATACTGAAGTTGAACAAACAACGAATAAACCTCTG
ATAGAAAATGTATTCACTGATCAGGTCACAATAGGGCAGAGTGTACAACTAGATCGACAATTCATTTCGTCTGAGCATGT
AAACCGTCATTTTGATCCAGATCTATTAGATATTTTTCTTGAAGAAGCTGATGAGTTGCTTGAAGGGATGGATACAGATC
TTAATATTTGGGTTAAAGATCAAGAAAACTTTGCCGCTCTTAATAATCTGATGCGTTATTTGCATACCTTAAAAGGTGGG
GCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAATTAGAAAGTATTTATGAGCGATTAATTCAAAAACA
ATTAATAGCTTCGTCTGCTCTCATTGATTTTATTCGACTAGTTCAAGATGACTTGGCTGACCGTCTTCAAATAGTACGTG
AACAGCACCTAGATTATGCTGCTTCTCATACTATTCAAGCGCTTAAAAATGCAGCCCAGACCTATGATTCATTTAGTTCT
ACTGTTAAAGATGAGCAAACACAAACTGAAGCATATGTTATACCTGAATTAAATTTTGAAGCATTACAACAAGAAGTAAT
AAATAATACGGCATTAAGCTTCAGTGAGTTAACTTCTGGTTCTGAGCCGATTGCCGAGTCTAATAATCAACTTGTTGAAT
ACGCTGAATTACGAGTTCTTTATGCTGATCACGATCATACAGAGAGTGTCCAAGATCAAGATATTAACTCTGTTGTCGAG
CAGACATTTATGGAGGAAGCGGCCGAACTATTAGAGATGGCCGATCACTTATTAAGACAATGGTTCGAGCAGCGTACAAA
CCGTAGTATCTTGCTTCAGCTGCAAAGGGCTGTGCACAGCTTGAAAGGTGGTTCCCGTATGTTGGGACTTGAAACCGTAC
AAGCGATTGCTTATCAGCTCGAAAACGCTTTTGAACAGTTTGCGCTTCATCATTTCAGCTCAAATATCTATGACAACTTA
TTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCAATTTTTAAACAAAATTATCAACACTTCGATGGTTTACAACAAAGTCT
GGAAAATATTCAGTTCATTGAAACGGCAATTCAAATTCCTAGTAAGTTAACTAGAACGGATCTCTTTAGCTCGGAACCTG
TAATGAGTTTTGTGCAAGGTGACGGTACAGAACCGCCGCCAATGATGGGCGCGTGGGAACACACAGAACGGCTTGATCAA
AATAATGAGATGATTCGAGTTTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGGTGAAAACTCGATTAACCGATC
GCGAATTGAAATGGATTTAAGCCAATTTGGTCATACCTTAGCGGAAATGGAATTGGCTATTCAGCGACTTGCAGATCAGT
TACGTCGAATGGAAGGCGAATTGGAAACCCAAATTATTGCAAAACACGGTATTGAGAACTCGCGTTATACGGAATTTGAT
CCTTTAGAGATGGACCAATATTCTTCATTAAATCAGTTATCAAAATCTCTTGCCGAGTCTGCATCGGATTTAGTAGATTT
TAAAAATACATTATCTGAAAAGATCAGAGACACCGAAGGTTTATTGGTACAGCAATCGCGTATTCAGGCTGAAATTCAAG
AAGGTCTCATGCGCACACGCTTAGTACCATTCTCCCGATTGTTGCCTCGTCTACAAAGGATTGTGCGACAGACTTCTACC
GCGTTAAATCGACCAGCAGAGCTTTTCGTAAATAATACGGAAGGCGAGTTGGACCGGACAATGCTAGAACGTTTGGTTAC
GCCACTTGAGCACATGCTTAGAAATGCAATTGACCATGGACTAGAAGACCGTGCACAACGTGAGCAAGCGCAGAAACCAG
AAACTGGACGTATTGAACTGAATATTCATCGTCAAGGTACAGATGTTGTCGTTACCTTTAAAGACGATGGACAAGGTATT
GATATCGAGAAGGTTCGTCAAAAAGCATTAATGTCTGGTTTGATTCACTCTGAACAAGTATTAGAACATCAAGATATTTT
ACAACTGATTTTCCATCCTGGTTTAAGCACTGCCGATCAAGTCACTCAGATTTCAGGTCGTGGTGTAGGACTGGATGTAG
TGCAGAGTGATATTAAGGCCTTAGGTGGCCACATAAGTGTCGACTCTGTCTATGGGCAGGGCACTGTCTTTACCATACGT
GTTCCAACGACTGTAGCCGTTAGTGATGCCTTAATGGTTAAAGTTGCTGATCAGCAATTTGCAATCCCATTGGCTCAAAT
TGATCGAATTGTGCGGGTTTCACCAGCATCATTAGAACAATATTTCGGAAGTGCACAAGAAGTCTTTGAATTTGAAAATA
AGCGCTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCAATTCCGCGCTTAAGTGGAATGATGTATTCATTA
CCAGTATTAATGATTAAGGCAAATAATGGACAAACCGTCGCATTATTAGTTGACCAACTGATTGGCTCGCGCGCACAGAT
TGTAGTTAAACCAATTGGACAACAATTTTCTAGCATTGGTGCGATTGCAGGAGCAACTATTTTAGGTGATGGTCAAGTTT
GCTTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAGTCTACTCATCGATATAAGCTGCTTAATGAAACTATCTAT
AGACAACGCGAGTCTGACGAACGACGTCTTATCATGATTGTAGATGACTCGGTAACTGTGCGTAAGGTGACGTCTCGTTT
ACTTGAACGTCAGGGCTATGATGTAGTCACAGCTAAAGATGGGGTCGATGCAATTGAACAGTTGGAAAATATTAAACCAG
ATCTCATGTTACTTGATATTGAAATGCCGCGAATGGATGGCTTTGAGGTGCTTAACCTCGTTCGACATCATGATCTACAC
CAAGATATGCCAGTGATTATGATTACATCACGAACTGGTGAAAAACACCGTGAACGAGCATTTGCTTTAGGTGTTAACCA
GTACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCCTTATTCATGACATTTGAAGGGGGACTTG
CCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

79.681

100

0.803