Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | HLV59_RS01645 | Genome accession | NZ_CP053391 |
| Coordinates | 348237..348797 (+) | Length | 186 a.a. |
| NCBI ID | WP_079748555.1 | Uniprot ID | - |
| Organism | Acinetobacter lactucae isolate QL-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 343237..353797
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HLV59_RS01620 | - | 345352..345507 (-) | 156 | WP_014207816.1 | hypothetical protein | - |
| HLV59_RS01625 | rpoZ | 345546..345824 (-) | 279 | WP_002116990.1 | DNA-directed RNA polymerase subunit omega | - |
| HLV59_RS01630 | gmk | 345897..346526 (-) | 630 | WP_125698033.1 | guanylate kinase | - |
| HLV59_RS01635 | ispH | 346649..347599 (+) | 951 | WP_016143645.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| HLV59_RS01640 | fimU | 347770..348243 (+) | 474 | WP_031949497.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| HLV59_RS01645 | pilV | 348237..348797 (+) | 561 | WP_079748555.1 | type IV pilus modification protein PilV | Machinery gene |
| HLV59_RS01650 | pilW | 348797..349798 (+) | 1002 | WP_171429203.1 | PilW family protein | Machinery gene |
| HLV59_RS01655 | pilX | 349795..350604 (+) | 810 | WP_171429205.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 19865.82 Da Isoelectric Point: 7.9110
>NTDB_id=444677 HLV59_RS01645 WP_079748555.1 348237..348797(+) (pilV) [Acinetobacter lactucae isolate QL-1]
MLMRSSKQKAQVGVGLLEVLVALILLAVGVLGYVALQVRAMDASSEALSKSQAMMIMRGLAENIRVNSAQASQYPAFVRS
YSNYSSTTAAPTSCFNSACTPSQLAQFDAYQAARNADQLGMKITMTNCPGVTSTMAQQRQCLFVFWGKTSPVITTTEGVT
SADVSSCMSTDGVYANNSNCLMMEAY
MLMRSSKQKAQVGVGLLEVLVALILLAVGVLGYVALQVRAMDASSEALSKSQAMMIMRGLAENIRVNSAQASQYPAFVRS
YSNYSSTTAAPTSCFNSACTPSQLAQFDAYQAARNADQLGMKITMTNCPGVTSTMAQQRQCLFVFWGKTSPVITTTEGVT
SADVSSCMSTDGVYANNSNCLMMEAY
Nucleotide
Download Length: 561 bp
>NTDB_id=444677 HLV59_RS01645 WP_079748555.1 348237..348797(+) (pilV) [Acinetobacter lactucae isolate QL-1]
ATGCTAATGCGGAGCTCTAAACAAAAAGCTCAAGTTGGGGTGGGTTTATTAGAAGTGTTGGTTGCCTTAATTTTACTTGC
GGTAGGGGTTTTAGGATATGTTGCCTTGCAAGTCCGGGCTATGGATGCTTCTTCAGAGGCATTAAGCAAATCTCAAGCCA
TGATGATTATGAGAGGATTAGCAGAAAACATTCGCGTAAATAGTGCTCAAGCTAGTCAATATCCTGCGTTTGTTCGTAGT
TATAGCAATTATTCATCTACTACCGCAGCTCCGACTTCCTGTTTCAATTCAGCTTGTACACCTTCTCAACTTGCTCAATT
TGATGCATATCAAGCAGCAAGAAATGCTGATCAACTTGGCATGAAAATCACAATGACAAATTGCCCTGGGGTTACAAGCA
CAATGGCTCAGCAGAGACAATGTCTGTTTGTTTTTTGGGGAAAAACCTCTCCAGTAATTACAACAACTGAAGGAGTCACT
AGCGCGGATGTGTCGAGTTGTATGAGTACAGATGGTGTTTATGCCAATAATTCAAATTGTTTGATGATGGAGGCATATTA
A
ATGCTAATGCGGAGCTCTAAACAAAAAGCTCAAGTTGGGGTGGGTTTATTAGAAGTGTTGGTTGCCTTAATTTTACTTGC
GGTAGGGGTTTTAGGATATGTTGCCTTGCAAGTCCGGGCTATGGATGCTTCTTCAGAGGCATTAAGCAAATCTCAAGCCA
TGATGATTATGAGAGGATTAGCAGAAAACATTCGCGTAAATAGTGCTCAAGCTAGTCAATATCCTGCGTTTGTTCGTAGT
TATAGCAATTATTCATCTACTACCGCAGCTCCGACTTCCTGTTTCAATTCAGCTTGTACACCTTCTCAACTTGCTCAATT
TGATGCATATCAAGCAGCAAGAAATGCTGATCAACTTGGCATGAAAATCACAATGACAAATTGCCCTGGGGTTACAAGCA
CAATGGCTCAGCAGAGACAATGTCTGTTTGTTTTTTGGGGAAAAACCTCTCCAGTAATTACAACAACTGAAGGAGTCACT
AGCGCGGATGTGTCGAGTTGTATGAGTACAGATGGTGTTTATGCCAATAATTCAAATTGTTTGATGATGGAGGCATATTA
A
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
82.796 |
100 |
0.828 |
| pilV | Acinetobacter baylyi ADP1 |
36.559 |
100 |
0.366 |