Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   MGAS15252_RS05580 Genome accession   NC_017040
Coordinates   1143297..1144334 (-) Length   345 a.a.
NCBI ID   WP_014407697.1    Uniprot ID   -
Organism   Streptococcus pyogenes MGAS15252     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1138297..1149334
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGAS15252_RS05560 (MGAS15252_1144) - 1139035..1139661 (+) 627 WP_002983834.1 prepilin peptidase -
  MGAS15252_RS05565 (MGAS15252_1145) rlmN 1139743..1140822 (-) 1080 WP_002992788.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  MGAS15252_RS05570 (MGAS15252_1146) - 1140826..1141446 (-) 621 WP_002992791.1 YutD family protein -
  MGAS15252_RS05575 (MGAS15252_1147) - 1141894..1142871 (-) 978 WP_002994809.1 LacI family DNA-binding transcriptional regulator -
  MGAS15252_RS05580 (MGAS15252_1148) sepM 1143297..1144334 (-) 1038 WP_014407697.1 SepM family pheromone-processing serine protease Regulator
  MGAS15252_RS05585 (MGAS15252_1149) coaD 1144321..1144812 (-) 492 WP_014407698.1 pantetheine-phosphate adenylyltransferase -
  MGAS15252_RS05590 (MGAS15252_1150) rsmD 1144802..1145341 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  MGAS15252_RS05595 (MGAS15252_1151) asnA 1145464..1146456 (-) 993 WP_014407699.1 aspartate--ammonia ligase -
  MGAS15252_RS05600 (MGAS15252_1152) arcC 1146770..1147720 (-) 951 WP_009880962.1 carbamate kinase -
  MGAS15252_RS05605 (MGAS15252_1153) - 1147740..1149071 (-) 1332 WP_014407700.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37571.33 Da        Isoelectric Point: 9.6692

>NTDB_id=44407 MGAS15252_RS05580 WP_014407697.1 1143297..1144334(-) (sepM) [Streptococcus pyogenes MGAS15252]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGMLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=44407 MGAS15252_RS05580 WP_014407697.1 1143297..1144334(-) (sepM) [Streptococcus pyogenes MGAS15252]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAATGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGAGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAACGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.275

100

0.693


Multiple sequence alignment