Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   HLB41_RS21180 Genome accession   NZ_CP053289
Coordinates   4172933..4173109 (-) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus cereus strain WPySW2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4167933..4178109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HLB41_RS21160 (HLB41_21190) - 4168557..4169303 (-) 747 WP_000966127.1 YjbA family protein -
  HLB41_RS21165 (HLB41_21195) - 4169447..4170235 (-) 789 WP_000513277.1 DUF2268 domain-containing putative Zn-dependent protease -
  HLB41_RS21170 (HLB41_21200) fabF 4170342..4171580 (-) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  HLB41_RS21175 (HLB41_21205) fabH 4171612..4172544 (-) 933 WP_001100547.1 beta-ketoacyl-ACP synthase III -
  HLB41_RS21180 (HLB41_21210) comZ 4172933..4173109 (-) 177 WP_001986215.1 ComZ family protein Regulator
  HLB41_RS21185 (HLB41_21215) - 4173164..4174036 (-) 873 WP_065212159.1 NAD(P)-dependent oxidoreductase -
  HLB41_RS21190 (HLB41_21220) - 4174066..4174800 (-) 735 WP_000028712.1 hydrolase -
  HLB41_RS21195 (HLB41_21225) - 4174957..4175139 (+) 183 WP_001211116.1 YjzD family protein -
  HLB41_RS21200 (HLB41_21230) clpC 4175178..4177778 (-) 2601 WP_000365401.1 ATP-dependent chaperone ClpB Regulator

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=443931 HLB41_RS21180 WP_001986215.1 4172933..4173109(-) (comZ) [Bacillus cereus strain WPySW2]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=443931 HLB41_RS21180 WP_001986215.1 4172933..4173109(-) (comZ) [Bacillus cereus strain WPySW2]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCCTATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586