Detailed information NTG0443704

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: IUJ43_RS24095
• Genome accession: NZ_CP064391
• Coordinates: 5246341..5247366 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain PartH-Paeruginosa-RM8376
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5241341..5252366

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IUJ43_RS24070 (IUJ43_24010)	-	5241529..5241846 (-)	318	WP_003120685.1	tetratricopeptide repeat protein	-
IUJ43_RS24075 (IUJ43_24015)	trkA	5241995..5243368 (-)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
IUJ43_RS24080 (IUJ43_24020)	rsmB	5243396..5244700 (-)	1305	WP_003114643.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
IUJ43_RS24085 (IUJ43_24025)	fmt	5244697..5245641 (-)	945	WP_003114642.1	methionyl-tRNA formyltransferase	-
IUJ43_RS24090 (IUJ43_24030)	def	5245696..5246202 (-)	507	WP_003107059.1	peptide deformylase	-
IUJ43_RS24095 (IUJ43_24035)	tsaP	5246341..5247366 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
IUJ43_RS24100 (IUJ43_24040)	dprA	5247501..5248589 (+)	1089	WP_003114641.1	DNA-processing protein DprA	Machinery gene
IUJ43_RS24105 (IUJ43_24045)	-	5248630..5249187 (+)	558	WP_003097300.1	Sua5/YciO/YrdC/YwlC family protein	-
IUJ43_RS24110 (IUJ43_24050)	-	5249197..5250174 (-)	978	WP_003111202.1	NADPH:quinone reductase	-
IUJ43_RS24115 (IUJ43_24055)	hemF	5250365..5251282 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
IUJ43_RS24120 (IUJ43_24060)	aroE	5251340..5252164 (+)	825	WP_003111201.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=443704 IUJ43_RS24095 WP_003097294.1 5246341..5247366(+) (tsaP) [Pseudomonas aeruginosa strain PartH-Paeruginosa-RM8376]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=443704 IUJ43_RS24095 WP_003097294.1 5246341..5247366(+) (tsaP) [Pseudomonas aeruginosa strain PartH-Paeruginosa-RM8376]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGCGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTAGCCACCGAAGGCGACGTCGCGACCCTGGCACTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAAACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393