Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   IUJ40_RS04730 Genome accession   NZ_CP064389
Coordinates   896590..897330 (+) Length   246 a.a.
NCBI ID   WP_000216878.1    Uniprot ID   A0A0H2XJD3
Organism   Staphylococcus aureus strain PartE-Saureus-RM8376     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 891590..902330
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IUJ40_RS04705 (IUJ40_04705) yhaM 892008..892949 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  IUJ40_RS04710 (IUJ40_04710) - 893070..894032 (-) 963 WP_000782121.1 foldase protein PrsA -
  IUJ40_RS04715 (IUJ40_04715) - 894237..894794 (-) 558 WP_000477959.1 DUF3267 domain-containing protein -
  IUJ40_RS04720 (IUJ40_04720) - 895527..895892 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  IUJ40_RS04725 (IUJ40_04725) - 896034..896456 (-) 423 WP_000004981.1 HIT family protein -
  IUJ40_RS04730 (IUJ40_04730) pptA 896590..897330 (+) 741 WP_000216878.1 ABC transporter ATP-binding protein EcsA Regulator
  IUJ40_RS04735 (IUJ40_04735) ecsB 897323..898546 (+) 1224 WP_001245769.1 ABC transporter permease EcsB -
  IUJ40_RS04740 (IUJ40_04740) traP 898670..899173 (-) 504 WP_000737976.1 signal transduction protein TRAP -
  IUJ40_RS04745 (IUJ40_04745) - 899336..899446 (+) 111 WP_001790154.1 hypothetical protein -
  IUJ40_RS04750 (IUJ40_04750) hemE 899436..900473 (+) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  IUJ40_RS04755 (IUJ40_04755) hemH 900531..901454 (+) 924 WP_000162881.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27717.04 Da        Isoelectric Point: 4.6672

>NTDB_id=443551 IUJ40_RS04730 WP_000216878.1 896590..897330(+) (pptA) [Staphylococcus aureus strain PartE-Saureus-RM8376]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDETMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=443551 IUJ40_RS04730 WP_000216878.1 896590..897330(+) (pptA) [Staphylococcus aureus strain PartE-Saureus-RM8376]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAACGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAGTTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XJD3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545