Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | SYNGTI_RS08815 | Genome accession | NC_017038 |
| Coordinates | 1866656..1867483 (+) | Length | 275 a.a. |
| NCBI ID | WP_010872899.1 | Uniprot ID | - |
| Organism | Synechocystis sp. PCC 6803 substr. GT-I | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1861656..1872483
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SYNGTI_RS08790 (SYNGTI_1697) | - | 1862166..1862906 (+) | 741 | WP_010872894.1 | WecB/TagA/CpsF family glycosyltransferase | - |
| SYNGTI_RS08795 (SYNGTI_1698) | - | 1863158..1863922 (+) | 765 | WP_010872895.1 | iron uptake porin | - |
| SYNGTI_RS08800 (SYNGTI_1699) | - | 1863952..1864392 (+) | 441 | WP_010872896.1 | hypothetical protein | - |
| SYNGTI_RS08805 (SYNGTI_1700) | pilM | 1864577..1865680 (+) | 1104 | WP_010872897.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| SYNGTI_RS08810 (SYNGTI_1701) | pilN | 1865762..1866616 (+) | 855 | WP_010872898.1 | PilN domain-containing protein | Machinery gene |
| SYNGTI_RS08815 (SYNGTI_1702) | pilO | 1866656..1867483 (+) | 828 | WP_010872899.1 | pilus assembly protein | Machinery gene |
| SYNGTI_RS08820 (SYNGTI_1703) | pilQ | 1867579..1869921 (+) | 2343 | WP_020862340.1 | type IV pilus secretin PilQ | Machinery gene |
| SYNGTI_RS08825 (SYNGTI_1704) | - | 1869930..1870754 (-) | 825 | WP_010872901.1 | FkbM family methyltransferase | - |
| SYNGTI_RS08830 (SYNGTI_1705) | - | 1870774..1871508 (-) | 735 | WP_010872902.1 | FkbM family methyltransferase | - |
Sequence
Protein
Download Length: 275 a.a. Molecular weight: 30066.97 Da Isoelectric Point: 3.9599
>NTDB_id=44336 SYNGTI_RS08815 WP_010872899.1 1866656..1867483(+) (pilO) [Synechocystis sp. PCC 6803 substr. GT-I]
MTSYSEEYSSTTTIIDEEFDAGGNYPTAFGITFTPQVSGISLGILGLLAMGYVLLNFVMPALGEYQQLRQDEEAKQAQVD
QQSPEVLMRRLANAEVQLQEAQQRKATVLELYANSEDLNTILYNFNTLFVNRNVKLVSFLPQGDPVVISDDSLGANAKNQ
LKRQTYTISMTGGFSETLALIRDIERLQPLILMKNLRTSLVNPEFPVNVVRDGDTVQVQTDAPDILTTDLTLEVFMPLTP
EEIAALTPPPPPPGQEGQPPAEGQPPAEGQAAPAP
MTSYSEEYSSTTTIIDEEFDAGGNYPTAFGITFTPQVSGISLGILGLLAMGYVLLNFVMPALGEYQQLRQDEEAKQAQVD
QQSPEVLMRRLANAEVQLQEAQQRKATVLELYANSEDLNTILYNFNTLFVNRNVKLVSFLPQGDPVVISDDSLGANAKNQ
LKRQTYTISMTGGFSETLALIRDIERLQPLILMKNLRTSLVNPEFPVNVVRDGDTVQVQTDAPDILTTDLTLEVFMPLTP
EEIAALTPPPPPPGQEGQPPAEGQPPAEGQAAPAP
Nucleotide
Download Length: 828 bp
>NTDB_id=44336 SYNGTI_RS08815 WP_010872899.1 1866656..1867483(+) (pilO) [Synechocystis sp. PCC 6803 substr. GT-I]
ATGACCAGCTACAGCGAAGAGTATTCATCAACGACAACAATTATTGATGAGGAATTTGATGCGGGAGGAAATTATCCAAC
TGCATTTGGGATAACCTTCACCCCCCAGGTAAGTGGCATTAGTTTAGGTATTCTTGGCTTGCTGGCCATGGGTTATGTTC
TGCTCAATTTTGTCATGCCAGCTTTGGGAGAATATCAACAACTAAGACAGGACGAAGAAGCTAAACAAGCTCAAGTGGAT
CAGCAGTCCCCGGAAGTGTTGATGCGTCGGCTAGCCAATGCGGAGGTGCAGTTACAGGAAGCTCAACAGCGTAAAGCGAC
AGTGTTGGAACTCTACGCCAATAGCGAGGACTTGAACACAATCCTCTATAACTTCAATACTCTATTCGTAAATAGAAACG
TGAAGTTAGTCAGCTTTTTGCCCCAGGGAGATCCGGTGGTAATCTCCGATGATAGTCTGGGGGCAAACGCAAAAAATCAG
CTTAAACGACAAACTTATACCATTTCCATGACGGGCGGTTTTAGTGAAACCCTGGCATTAATTCGGGATATTGAACGGCT
GCAACCGTTAATTTTGATGAAAAATTTGCGGACTAGCTTGGTTAATCCAGAATTTCCAGTCAATGTGGTTAGGGATGGTG
ACACTGTACAAGTGCAAACTGATGCGCCAGATATCCTAACTACGGATTTAACGTTGGAGGTGTTTATGCCATTAACCCCT
GAGGAGATTGCCGCCCTGACTCCTCCCCCGCCGCCGCCTGGACAGGAGGGTCAACCACCGGCTGAGGGACAACCTCCAGC
GGAAGGACAAGCGGCCCCGGCCCCCTAA
ATGACCAGCTACAGCGAAGAGTATTCATCAACGACAACAATTATTGATGAGGAATTTGATGCGGGAGGAAATTATCCAAC
TGCATTTGGGATAACCTTCACCCCCCAGGTAAGTGGCATTAGTTTAGGTATTCTTGGCTTGCTGGCCATGGGTTATGTTC
TGCTCAATTTTGTCATGCCAGCTTTGGGAGAATATCAACAACTAAGACAGGACGAAGAAGCTAAACAAGCTCAAGTGGAT
CAGCAGTCCCCGGAAGTGTTGATGCGTCGGCTAGCCAATGCGGAGGTGCAGTTACAGGAAGCTCAACAGCGTAAAGCGAC
AGTGTTGGAACTCTACGCCAATAGCGAGGACTTGAACACAATCCTCTATAACTTCAATACTCTATTCGTAAATAGAAACG
TGAAGTTAGTCAGCTTTTTGCCCCAGGGAGATCCGGTGGTAATCTCCGATGATAGTCTGGGGGCAAACGCAAAAAATCAG
CTTAAACGACAAACTTATACCATTTCCATGACGGGCGGTTTTAGTGAAACCCTGGCATTAATTCGGGATATTGAACGGCT
GCAACCGTTAATTTTGATGAAAAATTTGCGGACTAGCTTGGTTAATCCAGAATTTCCAGTCAATGTGGTTAGGGATGGTG
ACACTGTACAAGTGCAAACTGATGCGCCAGATATCCTAACTACGGATTTAACGTTGGAGGTGTTTATGCCATTAACCCCT
GAGGAGATTGCCGCCCTGACTCCTCCCCCGCCGCCGCCTGGACAGGAGGGTCAACCACCGGCTGAGGGACAACCTCCAGC
GGAAGGACAAGCGGCCCCGGCCCCCTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Synechocystis sp. PCC 6803 |
100 |
100 |
1 |