Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | A964_RS04125 | Genome accession | NC_018646 |
| Coordinates | 794010..794606 (+) | Length | 198 a.a. |
| NCBI ID | WP_000966735.1 | Uniprot ID | Q3K1U0 |
| Organism | Streptococcus agalactiae GD201008-001 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 789010..799606
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A964_RS04110 (A964_0765) | tpiA | 790194..790952 (+) | 759 | WP_000087883.1 | triose-phosphate isomerase | - |
| A964_RS04115 (A964_0766) | - | 791129..791821 (+) | 693 | WP_000240135.1 | phosphoglycerate mutase | - |
| A964_RS04120 (A964_0767) | pbp2b | 791950..793995 (+) | 2046 | WP_000934667.1 | penicillin-binding protein PBP2B | - |
| A964_RS04125 (A964_0768) | recR | 794010..794606 (+) | 597 | WP_000966735.1 | recombination mediator RecR | Machinery gene |
| A964_RS04130 (A964_0769) | - | 794747..795793 (+) | 1047 | WP_000032513.1 | D-alanine--D-alanine ligase | - |
| A964_RS04135 (A964_0770) | - | 795940..797307 (+) | 1368 | WP_000777517.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| A964_RS04140 (A964_0771) | - | 797494..798714 (+) | 1221 | WP_000793481.1 | L-lactate MFS transporter | - |
| A964_RS04145 (A964_0772) | - | 798843..799529 (+) | 687 | WP_000569006.1 | YwaF family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21619.82 Da Isoelectric Point: 4.5632
>NTDB_id=44319 A964_RS04125 WP_000966735.1 794010..794606(+) (recR) [Streptococcus agalactiae GD201008-001]
MLYPTPIAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDDDPCLICTDKTRDQS
VILVVEDSKDVSAMEKIQEYNGLYHVLHGLISPMNGISPDDINLKSLITRLMDGQVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
MLYPTPIAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDDDPCLICTDKTRDQS
VILVVEDSKDVSAMEKIQEYNGLYHVLHGLISPMNGISPDDINLKSLITRLMDGQVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
Nucleotide
Download Length: 597 bp
>NTDB_id=44319 A964_RS04125 WP_000966735.1 794010..794606(+) (recR) [Streptococcus agalactiae GD201008-001]
ATGCTTTACCCAACACCAATTGCTAAATTGATTGACAGCTTTTCAAAATTACCGGGTATAGGTACTAAAACAGCAACACG
TTTAGCTTTTTACACCATTGGTATGAGTGATGAAGATGTTAATGAATTTGCTAAGAATTTATTAGCTGCTAAGCGGGAAT
TAACCTATTGTTCTGTTTGTGGTAATTTGACTGATGATGATCCTTGCTTAATTTGTACAGATAAGACGCGTGACCAGTCT
GTTATCTTGGTTGTTGAAGATAGTAAAGATGTGTCAGCTATGGAAAAAATTCAAGAGTATAATGGTTTGTATCATGTCTT
ACATGGCTTAATTTCACCTATGAATGGTATTAGCCCTGATGACATTAATTTGAAAAGTTTAATTACTCGATTGATGGATG
GTCAGGTGACAGAAGTTATTGTTGCTACCAATGCGACTGCTGATGGTGAAGCTACATCAATGTATATTTCACGAGTCTTA
AAACCAGCTGGTATCAAAGTGACACGATTAGCGAGAGGTTTAGCTGTTGGTTCAGATATCGAATATGCAGATGAAGTAAC
CTTGCTTCGAGCAATCGAAAATCGTACAGAGTTATAA
ATGCTTTACCCAACACCAATTGCTAAATTGATTGACAGCTTTTCAAAATTACCGGGTATAGGTACTAAAACAGCAACACG
TTTAGCTTTTTACACCATTGGTATGAGTGATGAAGATGTTAATGAATTTGCTAAGAATTTATTAGCTGCTAAGCGGGAAT
TAACCTATTGTTCTGTTTGTGGTAATTTGACTGATGATGATCCTTGCTTAATTTGTACAGATAAGACGCGTGACCAGTCT
GTTATCTTGGTTGTTGAAGATAGTAAAGATGTGTCAGCTATGGAAAAAATTCAAGAGTATAATGGTTTGTATCATGTCTT
ACATGGCTTAATTTCACCTATGAATGGTATTAGCCCTGATGACATTAATTTGAAAAGTTTAATTACTCGATTGATGGATG
GTCAGGTGACAGAAGTTATTGTTGCTACCAATGCGACTGCTGATGGTGAAGCTACATCAATGTATATTTCACGAGTCTTA
AAACCAGCTGGTATCAAAGTGACACGATTAGCGAGAGGTTTAGCTGTTGGTTCAGATATCGAATATGCAGATGAAGTAAC
CTTGCTTCGAGCAATCGAAAATCGTACAGAGTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
88.384 |
100 |
0.884 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
66.667 |
100 |
0.667 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.231 |
98.485 |
0.485 |