Detailed information NTG0442987

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: HKO16_RS07935
• Genome accession: NZ_CP053098
• Coordinates: 1692181..1692882 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594584.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii ATCC 17978
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1687181..1697882

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HKO16_RS07900 (HKO16_07920)	kdsB	1687704..1688465 (+)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
HKO16_RS07905 (HKO16_07925)	-	1688477..1689457 (+)	981	WP_001075412.1	DNA polymerase III subunit delta'	-
HKO16_RS07910 (HKO16_07930)	-	1689469..1689810 (+)	342	WP_001183025.1	PilZ domain-containing protein	-
HKO16_RS07915 (HKO16_07935)	-	1689828..1690601 (+)	774	WP_000497298.1	TatD family hydrolase	-
HKO16_RS07920 (HKO16_07940)	-	1690639..1691247 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
HKO16_RS07925 (HKO16_07945)	-	1691257..1691811 (+)	555	WP_000841375.1	type II secretion system protein	-
HKO16_RS07930 (HKO16_07950)	xcpV	1691801..1692181 (+)	381	WP_000836915.1	type II secretion system minor pseudopilin GspI	Machinery gene
HKO16_RS07935 (HKO16_07955)	xcpW	1692181..1692882 (+)	702	WP_000594584.1	type II secretion system minor pseudopilin GspJ	Machinery gene
HKO16_RS07940 (HKO16_07960)	gspK	1692882..1693841 (+)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
HKO16_RS07945 (HKO16_07965)	-	1694071..1694667 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
HKO16_RS07950 (HKO16_07970)	ung	1694718..1695431 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
HKO16_RS07955 (HKO16_07975)	-	1695428..1696552 (+)	1125	WP_000982062.1	enoyl-CoA hydratase/isomerase family protein	-
HKO16_RS07960 (HKO16_07980)	tadA	1696559..1697062 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
HKO16_RS07965 (HKO16_07985)	-	1697132..1697575 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26622.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=442987 HKO16_RS07935 WP_000594584.1 1692181..1692882(+) (xcpW) [Acinetobacter baumannii ATCC 17978]
MIKNKYIHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLNQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=442987 HKO16_RS07935 WP_000594584.1 1692181..1692882(+) (xcpW) [Acinetobacter baumannii ATCC 17978]
ATGATAAAAAATAAATATATTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAGTTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAATCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996